BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023943
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   434   e-119
ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119
ref|XP_002521858.1| pentatricopeptide repeat-containing protein,...   414   e-113
emb|CBI32450.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containi...   395   e-107

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Vitis vinifera]
          Length = 762

 Score =  434 bits (1115), Expect = e-119
 Identities = 207/297 (69%), Positives = 255/297 (85%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            +I+GFCR  +L++AFQ+KQEMVEKGV PD VTYS LIQGLC  R+L+EAC L QEML+ G
Sbjct: 465  IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            LPPDEFTYTTLIN +C+EG++++AL+LHDEMI KGFLPD VTYSVLINGL+KQARTREAK
Sbjct: 525  LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
            +LLFKL Y++SVP DVTYDTL+E CS+ EFKSVVAL+K +CMKGLM+EAD+VF+S+ +RN
Sbjct: 585  RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 644

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELG 721
             KP EA YNVIIHGHCR  N+ KAF+LYKEM+ +  VP+T+ VI L K+LF EGM++E+ 
Sbjct: 645  HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 704

Query: 722  QVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLLPYSGRNVISG 892
            +VI D L+SC+LN AE+AKVLVE+N KEGNM+AV NVLT+MAKDGLLP SG+   +G
Sbjct: 705  EVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNSGKTAYAG 761



 Score =  153 bits (387), Expect = 8e-35
 Identities = 76/234 (32%), Positives = 124/234 (52%)
 Frame = +2

Query: 2   LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
           LI  +C+   +++AF L + M  KG+ P++++Y+ +I GLC +  + EA ++ +EM   G
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314

Query: 182 LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
             PDE TY TL+NG+C EGN H+AL +H EM+R G  P VVTY+ LIN + K      A 
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374

Query: 362 QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
           +   ++      P++ TY TL++                +  +GL+NEA ++   + +  
Sbjct: 375 EFFDQMRIRGLRPNERTYTTLID---------------GFSRQGLLNEAYRILNEMTESG 419

Query: 542 WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEG 703
           + P    YN  IHGHC    + +A  + +EMV   L P+ +    +      +G
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473



 Score =  151 bits (382), Expect = 3e-34
 Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 15/305 (4%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            LI GF R   L +A+++  EM E G  P VVTY+  I G C   ++ EA  + QEM+  G
Sbjct: 395  LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            L PD  +Y+T+I+GFC +G +  A  +  EM+ KG  PD VTYS LI GL +  R  EA 
Sbjct: 455  LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
             L  ++      PD+ TY T               L+ +YC++G +N+A  +   +  + 
Sbjct: 515  DLSQEMLDMGLPPDEFTYTT---------------LINAYCVEGDLNKALHLHDEMIHKG 559

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTI---------------CVIA 676
            + PD   Y+V+I+G  +     +A  L  +++    VP+ +                V+A
Sbjct: 560  FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVA 619

Query: 677  LTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDG 856
            L K    +G+  E  +V   +++        +  V++  + + GN+   FN+  EM   G
Sbjct: 620  LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 679

Query: 857  LLPYS 871
             +P++
Sbjct: 680  FVPHT 684



 Score =  133 bits (335), Expect = 9e-29
 Identities = 79/287 (27%), Positives = 140/287 (48%), Gaps = 2/287 (0%)
 Frame = +2

Query: 41   AFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSGLPPDEFTYTTLIN 220
            A ++ +EM+   V P+V TY+ LI+G C   +L +    F EM  +G  P+  TY TLI+
Sbjct: 198  AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257

Query: 221  GFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAKQLLFKLFYDDSVP 400
             +C  G + EA  L   M  KG  P++++Y+V+INGL ++   +EA ++L ++ Y    P
Sbjct: 258  AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317

Query: 401  DDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIH 580
            D+VTY+T               L+  YC +G  ++A  +   + +    P    Y  +I+
Sbjct: 318  DEVTYNT---------------LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALIN 362

Query: 581  GHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELGQVIRDVLKSCKLN 760
              C+ RN+++A + + +M    L PN      L      +G+  E  +++ ++ +S    
Sbjct: 363  SMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSP 422

Query: 761  NAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLLP--YSGRNVISGY 895
            +       +  +     M+    V+ EM + GL P   S   +ISG+
Sbjct: 423  SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469


>ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|222849505|gb|EEE87052.1|
            predicted protein [Populus trichocarpa]
          Length = 751

 Score =  432 bits (1111), Expect = e-119
 Identities = 203/288 (70%), Positives = 251/288 (87%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            +I GFCR+++L++AFQ+  EMVEKGV PD +TYS LIQGLC QR+L+EAC LFQEMLN  
Sbjct: 454  IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            L PDEFTYT+LING+C EG+++EALNLHDEMI+KGFLPD VTY+VLINGL+KQARTREAK
Sbjct: 514  LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
            +LL KLFYD+S+P+ +TYDTL+E CS  EFKSVVAL+K +CMKGLMNEADQVF+S+ KRN
Sbjct: 574  RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELG 721
             KP+EA YNVIIHGHCR  NVHKA  LYKEMV    +P+T+ +IAL K+L++EGMD++L 
Sbjct: 634  QKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLN 693

Query: 722  QVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLLP 865
             VIRD+L+SCKL++AE++K LV++N KEGN+DAVFN+LTEMAKDG LP
Sbjct: 694  LVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741



 Score =  164 bits (415), Expect = 5e-38
 Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 20/308 (6%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            +I  +C+ + +++AF+L + M  +G+ P+++TY+ +I GLC   ++ E   +  EM   G
Sbjct: 244  VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
              PD  TY TL+NG+C  GN H+AL LH EM+R G  PDVVTY+ LIN + K      A 
Sbjct: 304  FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVV--------------------ALMKSY 481
            +   ++      P+ VTY +L+   S   F                        AL+  +
Sbjct: 364  EFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGH 423

Query: 482  CMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNT 661
            C+ G M EA  + + +  +   PD  +Y+ II G CRY+ + +AF +  EMV   + P+ 
Sbjct: 424  CVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDA 483

Query: 662  ICVIALTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTE 841
            I   +L + L  +    E   + +++L    L +      L+    KEG+++   N+  E
Sbjct: 484  ITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDE 543

Query: 842  MAKDGLLP 865
            M K G LP
Sbjct: 544  MIKKGFLP 551



 Score =  140 bits (354), Expect = 6e-31
 Identities = 88/288 (30%), Positives = 142/288 (49%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            L+ G+C+  +  +A  L  EM+  G+ PDVVTY+ LI  +C    L+ A + F +M   G
Sbjct: 314  LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            L P+  TYT+LINGF  +G + EA  + DEMIR GF P +VTY+ L+NG     R  EA 
Sbjct: 374  LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
             LL  +      PD V+Y T++                 +C    ++ A Q+   + ++ 
Sbjct: 434  GLLRGMEGKGLSPDVVSYSTIIA---------------GFCRYQELDRAFQMNAEMVEKG 478

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELG 721
              PD   Y+ +I G C  R +++A DL++EM+  +L+P+     +L      EG   E  
Sbjct: 479  VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538

Query: 722  QVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLLP 865
             +  +++K   L +     VL+    K+        +L ++  D  +P
Sbjct: 539  NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIP 586



 Score =  108 bits (270), Expect = 3e-21
 Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 2/287 (0%)
 Frame = +2

Query: 41   AFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSGLPPDEFTYTTLIN 220
            A ++ +EM+  GV  +V +Y+ LI+G C    L    + F+EM  +   P+  TY T+I 
Sbjct: 187  AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 221  GFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAKQLLFKLFYDDSVP 400
             +C    + EA  L   M  +G  P+++TY+++INGL +  R  E   +L ++      P
Sbjct: 247  AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 401  DDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIH 580
            D VTY+T               L+  YC  G  ++A  +   + +    PD   Y  +I+
Sbjct: 307  DGVTYNT---------------LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLIN 351

Query: 581  GHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELGQVIRDVLKSCKLN 760
              C+  N+++A + + +M    L PN +   +L      +G   E  ++  ++++S    
Sbjct: 352  TMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP 411

Query: 761  NAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLLP--YSGRNVISGY 895
                   L+  +   G M+    +L  M   GL P   S   +I+G+
Sbjct: 412  TIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 45/208 (21%), Positives = 89/208 (42%)
 Frame = +2

Query: 242 VHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAKQLLFKLFYDDSVPDDVTYDT 421
           + +ALN+ D     GF+P V++Y+ +++ +      R  K ++F          +  Y  
Sbjct: 148 IEKALNIVDLAKLNGFMPGVLSYNAILDSI-----VRCRKPVIFA---------EKVYRE 193

Query: 422 LMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRN 601
           ++    S    S   L++ +C  G +    + F+ + +    P+   YN +I  +C+ + 
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253

Query: 602 VHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKV 781
           + +AF L + M    L PN +    +   L   G  +E   V+ ++ +     +      
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 782 LVEVNEKEGNMDAVFNVLTEMAKDGLLP 865
           LV    K GN      + +EM ++GL P
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPP 341


>ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538896|gb|EEF40494.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  414 bits (1065), Expect = e-113
 Identities = 196/291 (67%), Positives = 249/291 (85%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            +I+GF R+++L++AFQ+K EM+ K VLPD VTYS LIQGLC QR+L+EAC +FQEML   
Sbjct: 234  IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            LPPDEFTYTTLIN +C EG++++AL+LHDEMI+KGFLPD VTY+VLINGL+KQAR++EA+
Sbjct: 294  LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
            +LL KLFYDDS+P  VTY+TL+E C + EFKS VAL+K +CMKGLM+EADQVF+S+  +N
Sbjct: 354  RLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKN 413

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELG 721
             KP+EA YNVIIHGHCR  NV KA+ LYKEMV  + VP+T+ V+AL K+LF EGMD EL 
Sbjct: 414  HKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELN 473

Query: 722  QVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLLPYSG 874
            +VI D+L+SCKL +AE++KVLVE+N+KEGNMD VFN+LTEMAKDGL+P +G
Sbjct: 474  EVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTG 524



 Score =  157 bits (397), Expect = 6e-36
 Identities = 94/309 (30%), Positives = 160/309 (51%), Gaps = 21/309 (6%)
 Frame = +2

Query: 2   LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
           +I G+C+ +  ++AF   + M  KG+ P+++T++ +I GLC   +L E  ++  EM   G
Sbjct: 24  MIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKG 83

Query: 182 LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
             PDE TY TL+NG+C EGN H+AL LH EM+R G  P+VVTY+ LIN + K      A 
Sbjct: 84  YVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAM 143

Query: 362 QLLFKLFYDDSVPDDVTYDTLM-----------------ERCSSAEFKSVV---ALMKSY 481
           +   ++      P++ TY T++                 E   S    S+V   AL+  +
Sbjct: 144 EFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGH 203

Query: 482 CMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNT 661
           C+ G M EA  + + +  +   PD  +Y+ II G  R + + +AF +  EM+  +++P+ 
Sbjct: 204 CVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDA 263

Query: 662 ICVIALTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIA-KVLVEVNEKEGNMDAVFNVLT 838
           +   +L + L  +    E   + +++L + KL   E     L+    KEG+++   ++  
Sbjct: 264 VTYSSLIQGLCEQRRLTEACDMFQEML-TIKLPPDEFTYTTLINAYCKEGDLNKALHLHD 322

Query: 839 EMAKDGLLP 865
           EM + G LP
Sbjct: 323 EMIQKGFLP 331



 Score =  125 bits (313), Expect = 3e-26
 Identities = 76/270 (28%), Positives = 129/270 (47%)
 Frame = +2

Query: 56  QEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSGLPPDEFTYTTLINGFCIE 235
           +EM   G LP+VVTY+ +I G C  ++  EA    + M   GL P+  T+  +ING C +
Sbjct: 7   KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66

Query: 236 GNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAKQLLFKLFYDDSVPDDVTY 415
           G + E   +  EM RKG++PD VTY+ L+NG  K+    +A  L  ++  +   P+ VTY
Sbjct: 67  GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTY 126

Query: 416 DTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRY 595
                           +L+ S C  G +N A + F  ++ R   P+E  Y  II+G  + 
Sbjct: 127 ---------------TSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQ 171

Query: 596 RNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIA 775
             + +A+ +  EM R+  +P+ +   AL       G  +E   +++D++    L +    
Sbjct: 172 GLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSY 231

Query: 776 KVLVEVNEKEGNMDAVFNVLTEMAKDGLLP 865
             ++    +   +D  F +  EM    +LP
Sbjct: 232 STIISGFARNQELDRAFQMKVEMIGKSVLP 261



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 55/204 (26%), Positives = 92/204 (45%)
 Frame = +2

Query: 254 LNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAKQLLFKLFYDDSVPDDVTYDTLMER 433
           L    EM R G LP+VVTY+ +I+G  K  RT EA   L  +      P+ +T++     
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFN----- 57

Query: 434 CSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRNVHKA 613
                      ++   C  G + E  +V   + ++ + PDE  YN +++G+C+  N H+A
Sbjct: 58  ----------MIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQA 107

Query: 614 FDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKVLVEV 793
             L+ EMVR  L PN +   +L  S+   G      +    +       N      ++  
Sbjct: 108 LVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIING 167

Query: 794 NEKEGNMDAVFNVLTEMAKDGLLP 865
             ++G +D  + VL EM + G +P
Sbjct: 168 FAQQGLLDEAYRVLNEMTRSGFIP 191


>emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  407 bits (1047), Expect = e-111
 Identities = 194/277 (70%), Positives = 239/277 (86%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            +I+GFCR  +L++AFQ+KQEMVEKGV PD VTYS LIQGLC  R+L+EAC L QEML+ G
Sbjct: 261  IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            LPPDEFTYTTLIN +C+EG++++AL+LHDEMI KGFLPD VTYSVLINGL+KQARTREAK
Sbjct: 321  LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
            +LLFKL Y++SVP DVTYDTL+E CS+ EFKSVVAL+K +CMKGLM+EAD+VF+S+ +RN
Sbjct: 381  RLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERN 440

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELG 721
             KP EA YNVIIHGHCR  N+ KAF+LYKEM+ +  VP+T+ VI L K+LF EGM++E+ 
Sbjct: 441  HKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMS 500

Query: 722  QVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNV 832
            +VI D L+SC+LN AE+AKVLVE+N KEGNM+AV NV
Sbjct: 501  EVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNV 537



 Score =  153 bits (387), Expect = 8e-35
 Identities = 76/234 (32%), Positives = 124/234 (52%)
 Frame = +2

Query: 2   LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
           LI  +C+   +++AF L + M  KG+ P++++Y+ +I GLC +  + EA ++ +EM   G
Sbjct: 51  LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 110

Query: 182 LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
             PDE TY TL+NG+C EGN H+AL +H EM+R G  P VVTY+ LIN + K      A 
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 170

Query: 362 QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
           +   ++      P++ TY TL++                +  +GL+NEA ++   + +  
Sbjct: 171 EFFDQMRIRGLRPNERTYTTLID---------------GFSRQGLLNEAYRILNEMTESG 215

Query: 542 WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEG 703
           + P    YN  IHGHC    + +A  + +EMV   L P+ +    +      +G
Sbjct: 216 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 269



 Score =  151 bits (382), Expect = 3e-34
 Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 15/305 (4%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            LI GF R   L +A+++  EM E G  P VVTY+  I G C   ++ EA  + QEM+  G
Sbjct: 191  LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            L PD  +Y+T+I+GFC +G +  A  +  EM+ KG  PD VTYS LI GL +  R  EA 
Sbjct: 251  LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
             L  ++      PD+ TY T               L+ +YC++G +N+A  +   +  + 
Sbjct: 311  DLSQEMLDMGLPPDEFTYTT---------------LINAYCVEGDLNKALHLHDEMIHKG 355

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTI---------------CVIA 676
            + PD   Y+V+I+G  +     +A  L  +++    VP+ +                V+A
Sbjct: 356  FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVA 415

Query: 677  LTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDG 856
            L K    +G+  E  +V   +++        +  V++  + + GN+   FN+  EM   G
Sbjct: 416  LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475

Query: 857  LLPYS 871
             +P++
Sbjct: 476  FVPHT 480



 Score =  130 bits (327), Expect = 8e-28
 Identities = 77/280 (27%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
 Frame = +2

Query: 62  MVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSGLPPDEFTYTTLINGFCIEGN 241
           M+   V P+V TY+ LI+G C   +L +    F EM  +G  P+  TY TLI+ +C  G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 242 VHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAKQLLFKLFYDDSVPDDVTYDT 421
           + EA  L   M  KG  P++++Y+V+INGL ++   +EA ++L ++ Y    PD+VTY+T
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 422 LMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRN 601
                          L+  YC +G  ++A  +   + +    P    Y  +I+  C+ RN
Sbjct: 121 ---------------LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 165

Query: 602 VHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKV 781
           +++A + + +M    L PN      L      +G+  E  +++ ++ +S    +      
Sbjct: 166 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 225

Query: 782 LVEVNEKEGNMDAVFNVLTEMAKDGLLP--YSGRNVISGY 895
            +  +     M+    V+ EM + GL P   S   +ISG+
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265


>ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Glycine max]
          Length = 757

 Score =  395 bits (1015), Expect = e-107
 Identities = 190/291 (65%), Positives = 244/291 (83%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            +I GFCR R+L KAFQ+K+EMVEKGVLPD VTYS LIQGLC Q+KL EA  LF+EM+  G
Sbjct: 458  VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            LPPDE TYT+LIN +C++G + +AL LHDEM+++GFLPD VTYSVLINGL+K+ART+ AK
Sbjct: 518  LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577

Query: 362  QLLFKLFYDDSVPDDVTYDTLMERCSSAEFKSVVALMKSYCMKGLMNEADQVFKSIYKRN 541
            +LL KLFY++SVPDDVTY+TL+E CS+ EFKSV  L+K +CMKGLMNEAD+VFK++ +RN
Sbjct: 578  RLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRN 637

Query: 542  WKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALTKSLFAEGMDKELG 721
             KP+ A YN++IHGH R  NVHKA++LY E+  ++   +T+ VIAL K+L  EGM+ EL 
Sbjct: 638  HKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELS 697

Query: 722  QVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLLPYSG 874
            ++++++L+SC+LN+A++AKVLVEVN KEGNMDAV NVLTEMAKDGLLP  G
Sbjct: 698  RLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGG 748



 Score =  162 bits (409), Expect = 2e-37
 Identities = 97/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            LI   C+ + +++A  L + M   GV  ++++Y+ +I GLCG+ ++SE  +L +EM   G
Sbjct: 248  LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            L PDE TY TL+NGFC EGN+H+ L L  EM+ KG  P+VVTY+ LIN + K      A 
Sbjct: 308  LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 362  QLLFKLFYDDSVPDDVTYDTLM-----------------ERCSSAEFKSVV---ALMKSY 481
            ++  ++      P++ TY TL+                 E   S    SVV   AL+  Y
Sbjct: 368  EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427

Query: 482  CMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNT 661
            C  G + EA  + + + +R   PD  +Y+ +I G CR R + KAF + +EMV   ++P+T
Sbjct: 428  CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487

Query: 662  ICVIALTKSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTE 841
            +   +L + L  +    E   + R++++     +      L+     +G +     +  E
Sbjct: 488  VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547

Query: 842  MAKDGLLP 865
            M + G LP
Sbjct: 548  MVQRGFLP 555



 Score =  136 bits (342), Expect = 1e-29
 Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 23/311 (7%)
 Frame = +2

Query: 2    LITGFCRHRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSG 181
            +I G     DLEK     ++M ++G+ P+VVTY+ LI   C ++K+ EA  L + M   G
Sbjct: 213  IIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGG 272

Query: 182  LPPDEFTYTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAK 361
            +  +  +Y ++ING C +G + E   L +EM  KG +PD VTY+ L+NG  K+    +  
Sbjct: 273  VAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGL 332

Query: 362  QLLFKLFYDDSVPDDVTYDTLME-RCSSAEFKSVV-------------------ALMKSY 481
             LL ++      P+ VTY TL+   C +      V                    L+  +
Sbjct: 333  VLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGF 392

Query: 482  CMKGLMNEADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNT 661
            C KGLMNEA +V   +    + P    YN ++HG+C    V +A  + + MV   L P+ 
Sbjct: 393  CQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPD- 451

Query: 662  ICVIALTKSLFAEGMDKELG---QVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNV 832
              V++ +  +     ++ELG   Q+  ++++   L +      L++    +  +   F++
Sbjct: 452  --VVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDL 509

Query: 833  LTEMAKDGLLP 865
              EM + GL P
Sbjct: 510  FREMMRRGLPP 520



 Score =  117 bits (294), Expect = 5e-24
 Identities = 76/301 (25%), Positives = 143/301 (47%), Gaps = 20/301 (6%)
 Frame = +2

Query: 23   HRDLEKAFQLKQEMVEKGVLPDVVTYSCLIQGLCGQRKLSEACKLFQEMLNSGLPPDEFT 202
            HRD + A ++ ++MV  GV P+V TY+ +I+G+  Q  L +     ++M   G+ P+  T
Sbjct: 185  HRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVT 244

Query: 203  YTTLINGFCIEGNVHEALNLHDEMIRKGFLPDVVTYSVLINGLSKQARTREAKQLLFKLF 382
            Y TLI+  C +  V EA+ L   M   G   ++++Y+ +INGL  + R  E  +L+ ++ 
Sbjct: 245  YNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR 304

Query: 383  YDDSVPDDVTYDTLME--------------------RCSSAEFKSVVALMKSYCMKGLMN 502
                VPD+VTY+TL+                     +  S    +   L+   C  G ++
Sbjct: 305  GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLS 364

Query: 503  EADQVFKSIYKRNWKPDEAAYNVIIHGHCRYRNVHKAFDLYKEMVRANLVPNTICVIALT 682
             A ++F  +  R  +P+E  Y  +I G C+   +++A+ +  EM+ +   P+ +   AL 
Sbjct: 365  RAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424

Query: 683  KSLFAEGMDKELGQVIRDVLKSCKLNNAEIAKVLVEVNEKEGNMDAVFNVLTEMAKDGLL 862
                  G  +E   ++R +++     +      ++    +E  +   F +  EM + G+L
Sbjct: 425  HGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVL 484

Query: 863  P 865
            P
Sbjct: 485  P 485