BLASTX nr result

ID: Coptis21_contig00023940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023940
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519404.1| conserved hypothetical protein [Ricinus comm...   134   6e-30
emb|CBI17905.3| unnamed protein product [Vitis vinifera]              129   2e-28
emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]   129   2e-28
ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26

>ref|XP_002519404.1| conserved hypothetical protein [Ricinus communis]
           gi|223541471|gb|EEF43021.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1008

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/117 (60%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
 Frame = -3

Query: 346 EIGRLLTDYSNSNSKVWLMATANYQTYMKCRQMKQPSLETKWALQAVSVPXXXXXXXXXX 167
           E GRLL+DYS SN++VWLMATANYQTYM+C QM+QPSLE +WALQAVSVP          
Sbjct: 357 ETGRLLSDYSCSNARVWLMATANYQTYMRC-QMRQPSLEIEWALQAVSVPSGGLGLSLHG 415

Query: 166 XXXLDSRMTLLQNPPQMLETK--LSVCVEEHEKLTCCAECTSNFEKDAVFLKSGQQK 2
               +SRMT  QNP Q+LETK  +S   +E +KLTCC EC S++EK+A  LKS QQK
Sbjct: 416 SSIHESRMTFNQNPSQVLETKPLISNSKDEQDKLTCCPECISSYEKEAQVLKSVQQK 472


>emb|CBI17905.3| unnamed protein product [Vitis vinifera]
          Length = 974

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/115 (58%), Positives = 80/115 (69%)
 Frame = -3

Query: 346 EIGRLLTDYSNSNSKVWLMATANYQTYMKCRQMKQPSLETKWALQAVSVPXXXXXXXXXX 167
           EIGRLL+DY+ SN++VWLMATA+YQTYM+C QMKQPSLE +WALQAVSVP          
Sbjct: 351 EIGRLLSDYTTSNTRVWLMATASYQTYMRC-QMKQPSLEIQWALQAVSVPSGGLGLSLHA 409

Query: 166 XXXLDSRMTLLQNPPQMLETKLSVCVEEHEKLTCCAECTSNFEKDAVFLKSGQQK 2
               DSR         +LETK     EEH+KL+CCAECT+N+EK+    KSGQQK
Sbjct: 410 SSVHDSRSQ--NQAHHVLETKPFAAKEEHDKLSCCAECTANYEKEVGLFKSGQQK 462


>emb|CAN66169.1| hypothetical protein VITISV_000145 [Vitis vinifera]
          Length = 1032

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/115 (58%), Positives = 80/115 (69%)
 Frame = -3

Query: 346 EIGRLLTDYSNSNSKVWLMATANYQTYMKCRQMKQPSLETKWALQAVSVPXXXXXXXXXX 167
           EIGRLL+DY+ SN++VWLMATA+YQTYM+C QMKQPSLE +WALQAVSVP          
Sbjct: 371 EIGRLLSDYTTSNTRVWLMATASYQTYMRC-QMKQPSLEIQWALQAVSVPSGGLGLSLHA 429

Query: 166 XXXLDSRMTLLQNPPQMLETKLSVCVEEHEKLTCCAECTSNFEKDAVFLKSGQQK 2
               DSR         +LETK     EEH+KL+CCAECT+N+EK+    KSGQQK
Sbjct: 430 SSVHDSRSQ--NQAHHVLETKPFAAKEEHDKLSCCAECTANYEKEVGLFKSGQQK 482


>ref|XP_002325256.1| predicted protein [Populus trichocarpa] gi|222866690|gb|EEF03821.1|
           predicted protein [Populus trichocarpa]
          Length = 899

 Score =  125 bits (313), Expect = 5e-27
 Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
 Frame = -3

Query: 346 EIGRLLTDYSNSNSKVWLMATANYQTYMKCRQMKQPSLETKWALQAVSVPXXXXXXXXXX 167
           EIGRLL++YS+SN KVWLMATA+YQTYMKC QM+QPSLET+WALQAVSVP          
Sbjct: 271 EIGRLLSEYSSSNRKVWLMATASYQTYMKC-QMRQPSLETQWALQAVSVP-----SGGLG 324

Query: 166 XXXLDSRMTLLQNPPQMLETK--LSVCVEEHEKLTCCAECTSNFEKDAVFLKSGQQK 2
                SR+    NP  +LETK  ++   EE ++ TCC EC SN+EK+   LKSGQQK
Sbjct: 325 LSLHPSRIKFSHNPSLVLETKPFINDGKEEEDRFTCCPECNSNYEKEVHSLKSGQQK 381


>ref|XP_002309005.1| predicted protein [Populus trichocarpa] gi|222854981|gb|EEE92528.1|
           predicted protein [Populus trichocarpa]
          Length = 896

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 2/117 (1%)
 Frame = -3

Query: 346 EIGRLLTDYSNSNSKVWLMATANYQTYMKCRQMKQPSLETKWALQAVSVPXXXXXXXXXX 167
           EIGRLL++YS+SN+KVWLMATA+YQTYMKC QM++PS+E +WALQAVSVP          
Sbjct: 270 EIGRLLSEYSSSNTKVWLMATASYQTYMKC-QMRRPSIEIQWALQAVSVPSGGLGLSL-- 326

Query: 166 XXXLDSRMTLLQNPPQMLETK--LSVCVEEHEKLTCCAECTSNFEKDAVFLKSGQQK 2
                   ++  NP  +LETK  ++   EE +K TCC ECTSN+EK+   LKSGQQK
Sbjct: 327 -----HASSISNNPSHVLETKPFINNGKEEQDKFTCCQECTSNYEKEVQLLKSGQQK 378


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