BLASTX nr result

ID: Coptis21_contig00023934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023934
         (1396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like...   552   e-155
ref|XP_002517082.1| serine-threonine protein kinase, plant-type,...   510   e-142
ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like...   509   e-142
gb|ACU18125.1| unknown [Glycine max]                                  501   e-139
ref|XP_003556064.1| PREDICTED: leucine-rich repeat extensin-like...   498   e-138

>ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Vitis
            vinifera]
          Length = 394

 Score =  552 bits (1423), Expect = e-155
 Identities = 262/344 (76%), Positives = 296/344 (86%), Gaps = 3/344 (0%)
 Frame = +1

Query: 19   LIFRSSSQQASLD---LPNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGPDVCNYNGVYC 189
            L F + S Q S     LPNPR+L A+ ALQAWKHVI+SDPK FTSNW G DVCNY GVYC
Sbjct: 22   LSFSAPSHQDSYSPPPLPNPRILNAYTALQAWKHVILSDPKNFTSNWCGFDVCNYKGVYC 81

Query: 190  APAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGTIPKSFQNLRLL 369
            APAPDD HITTVAGIDLNH +I GSLPEELGLLTDLA+FHINSNRFCGT+P SF++LRLL
Sbjct: 82   APAPDDPHITTVAGIDLNHADIAGSLPEELGLLTDLALFHINSNRFCGTLPDSFRHLRLL 141

Query: 370  YELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFINNNKFRFS 549
            YELD+SNN F GQFP VVLCL SLKFLDIRYN+F+GD+P  LFD+KLDA+F+NNNKF+ S
Sbjct: 142  YELDISNNRFKGQFPSVVLCLPSLKFLDIRYNEFEGDIPTGLFDLKLDAIFVNNNKFKSS 201

Query: 550  LPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNVT 729
            LP NIGNSPVSV+V ANN+L+GC PSSL+++  TLNE+I+ N+G+ GCL PEIGLLKNVT
Sbjct: 202  LPGNIGNSPVSVIVFANNNLNGCLPSSLSKMAKTLNELIITNAGLKGCLSPEIGLLKNVT 261

Query: 730  VFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPARICSLPNLENFTYSNNYFCGE 909
            VFDVS N+LVG LPET+G MKSLEQLNVA NKLSGEIP  ICSLPNLENFTYS NYFCGE
Sbjct: 262  VFDVSSNELVGPLPETIGEMKSLEQLNVAHNKLSGEIPETICSLPNLENFTYSYNYFCGE 321

Query: 910  PQSCLKLPDKDDKKNCIPDRPLQRSAEECASFLSHPVDCNAFGC 1041
            P +CLKLP  DD+KNCIPDRP+QRS EECA+FL+ PVDC AFGC
Sbjct: 322  PPTCLKLPANDDQKNCIPDRPMQRSPEECAAFLAQPVDCGAFGC 365


>ref|XP_002517082.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223543717|gb|EEF45245.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 356

 Score =  510 bits (1313), Expect = e-142
 Identities = 246/345 (71%), Positives = 283/345 (82%), Gaps = 6/345 (1%)
 Frame = +1

Query: 1    LGLLFVLIFRSSSQQASLD------LPNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGPD 162
            LG+L V  F   S QAS        +P+PRLLKA+ ALQAWKH I SDPK FTSNWYGPD
Sbjct: 11   LGILTVF-FSKPSYQASYSSSPPPPIPSPRLLKAYIALQAWKHAITSDPKNFTSNWYGPD 69

Query: 163  VCNYNGVYCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGTIP 342
            VC+Y GVYCAPA DD H  TVAGIDLNH NI GSLPE+LGLLTDLA+FH+NSNRFCGTIP
Sbjct: 70   VCSYTGVYCAPALDDPHTITVAGIDLNHANIAGSLPEDLGLLTDLALFHLNSNRFCGTIP 129

Query: 343  KSFQNLRLLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALF 522
             SF++LRLLYE D+SNN F+G+ P V+LCL+SLKFLD+RYN+F G+VP+KLFD+KLDALF
Sbjct: 130  DSFRHLRLLYEFDISNNQFSGELPPVLLCLTSLKFLDVRYNEFYGNVPSKLFDLKLDALF 189

Query: 523  INNNKFRFSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPP 702
            INNNKF+ SLP N GNSPVSV+VLANND+SGC PSSL ++G TL +IIL N G+ GC+  
Sbjct: 190  INNNKFKSSLPENFGNSPVSVIVLANNDISGCIPSSLTKMGRTLKQIILTNMGLNGCIQS 249

Query: 703  EIGLLKNVTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPARICSLPNLENFT 882
            +IGLL  VTVFDVS NKLVGSLP++MG MKSLEQLNVA NKLSG IP  IC LP LENFT
Sbjct: 250  DIGLLNQVTVFDVSFNKLVGSLPDSMGEMKSLEQLNVAHNKLSGNIPESICLLPRLENFT 309

Query: 883  YSNNYFCGEPQSCLKLPDKDDKKNCIPDRPLQRSAEECASFLSHP 1017
            YS+NYFCGEP  CLKL  KDD++NCIP RPLQRS EEC +F ++P
Sbjct: 310  YSDNYFCGEPPVCLKLQAKDDRRNCIPHRPLQRSPEECKAFYAYP 354


>ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Cucumis
            sativus] gi|449518721|ref|XP_004166385.1| PREDICTED:
            leucine-rich repeat extensin-like protein 6-like [Cucumis
            sativus]
          Length = 376

 Score =  509 bits (1312), Expect = e-142
 Identities = 241/348 (69%), Positives = 281/348 (80%), Gaps = 4/348 (1%)
 Frame = +1

Query: 10   LFVLIFRSSSQQASLD----LPNPRLLKAFDALQAWKHVIVSDPKKFTSNWYGPDVCNYN 177
            +F L+F+ S QQ        LPNPRLLKA+ ALQAWKH I  DP  FT+NWYGPDVCNY+
Sbjct: 17   IFTLLFQPSHQQTPSPPPPFLPNPRLLKAYTALQAWKHAITEDPSNFTANWYGPDVCNYS 76

Query: 178  GVYCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGTIPKSFQN 357
            GV+CAPA DD  I TVAGIDLNHGNI G+LP++LGLLTDLA+FHINSNRFCGTIP SF+ 
Sbjct: 77   GVFCAPALDDPDIRTVAGIDLNHGNISGTLPDDLGLLTDLALFHINSNRFCGTIPNSFRC 136

Query: 358  LRLLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFINNNK 537
            L LL+ELD+SNN F+G+FP V+L L +LKFLDIR+N F GDVP+ LF++KLDALFINNN 
Sbjct: 137  LTLLFELDISNNDFSGEFPSVILSLPALKFLDIRFNKFSGDVPSSLFELKLDALFINNND 196

Query: 538  FRFSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLL 717
            F FSLP NIGNSPVSVLV ANN+++GC PSS++ +  TLNEII+  SG+ GCLP EIG L
Sbjct: 197  FNFSLPENIGNSPVSVLVFANNNINGCLPSSISNMNTTLNEIIITGSGLIGCLPSEIGSL 256

Query: 718  KNVTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPARICSLPNLENFTYSNNY 897
             N+TVFDVS N LVG LPETM  MK LEQLNVA N+LSGEIPA ICSLP L+NFT+S N+
Sbjct: 257  SNLTVFDVSDNNLVGPLPETMAGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTFSYNF 316

Query: 898  FCGEPQSCLKLPDKDDKKNCIPDRPLQRSAEECASFLSHPVDCNAFGC 1041
            FC EP  CLKL   DD+KNC+PDRP QRS EEC +F S+PVDC+ FGC
Sbjct: 317  FCSEPPVCLKLQASDDQKNCLPDRPFQRSPEECKAFYSNPVDCSVFGC 364


>gb|ACU18125.1| unknown [Glycine max]
          Length = 390

 Score =  501 bits (1289), Expect = e-139
 Identities = 238/346 (68%), Positives = 277/346 (80%), Gaps = 2/346 (0%)
 Frame = +1

Query: 10   LFVLIFRSSSQQASLDLP--NPRLLKAFDALQAWKHVIVSDPKKFTSNWYGPDVCNYNGV 183
            + + I   S Q  S  LP  NPRL KA+ ALQAWKH I SDPK FT NW GP+VCNY G+
Sbjct: 22   ILISIINPSHQDPSSPLPPINPRLTKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGI 81

Query: 184  YCAPAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGTIPKSFQNLR 363
            YCAPA DD HI TVAG+DLNH  I GSLPEELGLLTDL++ HINSNRFCG++P SF  L 
Sbjct: 82   YCAPALDDPHIYTVAGVDLNHATISGSLPEELGLLTDLSLLHINSNRFCGSLPTSFDKLH 141

Query: 364  LLYELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFINNNKFR 543
            LL+ELD+SNN F+G FPEVVLC+ +LK+LDIR+N+F G+VP++LFD+KLDALFINNN F+
Sbjct: 142  LLHELDISNNQFSGPFPEVVLCIPNLKYLDIRFNNFHGNVPSRLFDVKLDALFINNNNFQ 201

Query: 544  FSLPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKN 723
            FSLP+N GNS  SV+V ANNDL GC PSSL ++  TLNEII+ NSG+TGCLP EIG L  
Sbjct: 202  FSLPNNFGNSTASVVVFANNDLKGCLPSSLVKMKGTLNEIIITNSGLTGCLPSEIGDLDM 261

Query: 724  VTVFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPARICSLPNLENFTYSNNYFC 903
            VTVFDVS NKLVG LPE++G MK LEQLNVA+N+LSGEIP  +C LP LENFTYS NYFC
Sbjct: 262  VTVFDVSFNKLVGELPESLGRMKKLEQLNVANNELSGEIPESVCMLPRLENFTYSYNYFC 321

Query: 904  GEPQSCLKLPDKDDKKNCIPDRPLQRSAEECASFLSHPVDCNAFGC 1041
             E  +CLKL DKDD KNCIP RPLQRS +EC +F +HPV C+AFGC
Sbjct: 322  SESPTCLKLKDKDDTKNCIPYRPLQRSLDECKAFYAHPVHCSAFGC 367


>ref|XP_003556064.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Glycine
            max]
          Length = 399

 Score =  498 bits (1283), Expect = e-138
 Identities = 237/344 (68%), Positives = 275/344 (79%), Gaps = 2/344 (0%)
 Frame = +1

Query: 16   VLIFRSSSQQASLDLP--NPRLLKAFDALQAWKHVIVSDPKKFTSNWYGPDVCNYNGVYC 189
            + I   S Q  S  LP  NPRL KA+ ALQAWK+ I SDPK FT NW GP+VCNY G+YC
Sbjct: 23   ISIINPSQQDPSSPLPPLNPRLTKAYTALQAWKYKITSDPKNFTLNWCGPNVCNYTGIYC 82

Query: 190  APAPDDRHITTVAGIDLNHGNIGGSLPEELGLLTDLAVFHINSNRFCGTIPKSFQNLRLL 369
            APA DD HI TVAG+DLNH  I GSLPEELGLLTDL++FHINSNRFCG++P SF  L LL
Sbjct: 83   APALDDPHIYTVAGVDLNHATISGSLPEELGLLTDLSLFHINSNRFCGSLPNSFDKLHLL 142

Query: 370  YELDVSNNLFAGQFPEVVLCLSSLKFLDIRYNDFKGDVPNKLFDMKLDALFINNNKFRFS 549
            +ELD+SNN F+G FPEVVLC+ +LK+LDIR+N+F G+VP++LFD+KLDALFINNN F+FS
Sbjct: 143  HELDISNNQFSGPFPEVVLCIPNLKYLDIRFNNFHGNVPSRLFDVKLDALFINNNNFQFS 202

Query: 550  LPSNIGNSPVSVLVLANNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNVT 729
            LP N+GNSPVSV+V ANNDL GC P SL ++  TLNEII+ NSG+TGCLP EIG L  VT
Sbjct: 203  LPENLGNSPVSVVVFANNDLKGCLPLSLVKMKGTLNEIIITNSGLTGCLPSEIGDLDKVT 262

Query: 730  VFDVSRNKLVGSLPETMGNMKSLEQLNVADNKLSGEIPARICSLPNLENFTYSNNYFCGE 909
            VFDVS NKLVG LPE++G MK LEQLNVA N LSGEIP  +C LP LENFTYS NYFC E
Sbjct: 263  VFDVSFNKLVGELPESLGRMKRLEQLNVAHNMLSGEIPESVCMLPRLENFTYSYNYFCSE 322

Query: 910  PQSCLKLPDKDDKKNCIPDRPLQRSAEECASFLSHPVDCNAFGC 1041
               CLKL +KDD KNCIP RPLQ+S +EC +F +HPV C+AFGC
Sbjct: 323  SPVCLKLKEKDDTKNCIPYRPLQKSPDECKAFYAHPVHCSAFGC 366


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