BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023929
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-15
ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...    73   4e-13
ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [M...    75   5e-13
ref|XP_002468406.1| hypothetical protein SORBIDRAFT_01g045370 [S...    76   2e-12
ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase ac...    70   5e-12

>ref|XP_002303243.1| predicted protein [Populus trichocarpa] gi|222840675|gb|EEE78222.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 78.2 bits (191), Expect(2) = 1e-15
 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
 Frame = +3

Query: 60  FLTDMTQDQMVAQLTSRSNLLFWKCIVLGTVSVGSLGDVLFKYWRRMETMDAAKARL--- 230
           FL DMT+D+MVA L  ++ +L W  IVLG++S+G LG  + + W + +     +++    
Sbjct: 255 FLADMTKDEMVADLAFKAKILLWSGIVLGSLSIGVLGFAVMRNWNKWKAWRQRRSQQPIH 314

Query: 231 ARMEEDSTQVRDKEDATEDIPNGQLCVICLM 323
              +ED +Q+ D EDA  D+P GQLCVICLM
Sbjct: 315 TTSDEDVSQIDDNEDA-GDVPEGQLCVICLM 344



 Score = 29.3 bits (64), Expect(2) = 1e-15
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 2   CSSQEDGNTQIKPCKELPYF 61
           C+S+ DG  +IK CKELPYF
Sbjct: 237 CNSK-DGIPEIKSCKELPYF 255


>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|297743001|emb|CBI35868.3| unnamed
           protein product [Vitis vinifera]
          Length = 391

 Score = 72.8 bits (177), Expect(2) = 4e-13
 Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = +3

Query: 60  FLTDMTQDQMVAQLTSRSNLLFWKCIVLGTVSVGSLGDVLFKYWRRMETMDAAKA--RLA 233
           FL++M++DQMV  L  +S +LFW  ++LG+VS+G LG  + + W R +     +     +
Sbjct: 255 FLSEMSKDQMVVDLVFKSKVLFWSGVILGSVSIGVLGYAVVRNWNRWKEWRQQRGVRPPS 314

Query: 234 RMEEDSTQVRDKEDATEDIPNGQLCVICLM 323
           +   D T  +  ED   D+P+G+LCVICLM
Sbjct: 315 QAVTDDTDTQIAEDDAGDVPDGELCVICLM 344



 Score = 26.6 bits (57), Expect(2) = 4e-13
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 8   SQEDGNTQIKPCKELPYFFN 67
           S ++G  +IK CK+LPYF +
Sbjct: 238 SLKNGIPEIKSCKDLPYFLS 257


>ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [Medicago truncatula]
           gi|66947626|emb|CAJ00009.1| C3HC4 zinc finger containing
           protein [Medicago truncatula]
           gi|355521317|gb|AET01771.1| Baculoviral IAP
           repeat-containing protein [Medicago truncatula]
          Length = 383

 Score = 75.5 bits (184), Expect(2) = 5e-13
 Identities = 33/88 (37%), Positives = 56/88 (63%)
 Frame = +3

Query: 60  FLTDMTQDQMVAQLTSRSNLLFWKCIVLGTVSVGSLGDVLFKYWRRMETMDAAKARLARM 239
           +L+D+++DQM+  L+ ++ LLFW  I+LG++SVG +G  + + W + +     +    R 
Sbjct: 249 YLSDLSKDQMIVDLSFKTKLLFWSGILLGSMSVGIIGYAVVRNWNKWKQWKQQRQLQQRR 308

Query: 240 EEDSTQVRDKEDATEDIPNGQLCVICLM 323
           ++    V   +D  ED+P+GQLCVICLM
Sbjct: 309 QQPIEPVPPTDDEIEDVPDGQLCVICLM 336



 Score = 23.5 bits (49), Expect(2) = 5e-13
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 8   SQEDGNTQIKPCKELPYFFN 67
           S  +G  +IK C +LPY+ +
Sbjct: 232 SLRNGIAEIKACNDLPYYLS 251


>ref|XP_002468406.1| hypothetical protein SORBIDRAFT_01g045370 [Sorghum bicolor]
           gi|241922260|gb|EER95404.1| hypothetical protein
           SORBIDRAFT_01g045370 [Sorghum bicolor]
          Length = 374

 Score = 75.9 bits (185), Expect(2) = 2e-12
 Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
 Frame = +3

Query: 60  FLTDMTQDQMVAQLTSRSNLLFWKCIVLGTVSVGSLGDVLFKYWRRMETMDAAKARLARM 239
           FL+++T+D+M AQL SR+ +LFW  IVLGT+SV  +G  +++ W+R++    A+      
Sbjct: 237 FLSELTKDEMQAQLASRARILFWGSIVLGTLSVCLVGHAIYRGWKRIKLRREARQAQQMF 296

Query: 240 EEDSTQVRD---KEDATEDIPNGQLCVICL 320
           E+    +R+    +D  +D+ +GQLCV+CL
Sbjct: 297 EDAEDAIREDNSSDDDDDDVGDGQLCVVCL 326



 Score = 21.2 bits (43), Expect(2) = 2e-12
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   CSSQEDGNTQIKPCKELPYFFN 67
           C ++   + +I  C E+P+F +
Sbjct: 218 CRAKNAESVEITSCPEIPFFLS 239


>ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           [Glycine max]
          Length = 387

 Score = 70.1 bits (170), Expect(2) = 5e-12
 Identities = 33/88 (37%), Positives = 53/88 (60%)
 Frame = +3

Query: 60  FLTDMTQDQMVAQLTSRSNLLFWKCIVLGTVSVGSLGDVLFKYWRRMETMDAAKARLARM 239
           FL+D+++DQM+  L+ ++ +LFW  I LG++SVG LG  + + W + +     +    + 
Sbjct: 253 FLSDLSKDQMIMDLSIKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWKQQRQLQQQR 312

Query: 240 EEDSTQVRDKEDATEDIPNGQLCVICLM 323
           +  S      +D  ED P+GQLCVICLM
Sbjct: 313 QAVSDVEPQMDDEIEDAPDGQLCVICLM 340



 Score = 25.4 bits (54), Expect(2) = 5e-12
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 8   SQEDGNTQIKPCKELPYFFN 67
           S ++G  +IK CK LPYF +
Sbjct: 236 SLKNGIAEIKSCKYLPYFLS 255