BLASTX nr result

ID: Coptis21_contig00023926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023926
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]            59   5e-07
emb|CBI19854.3| unnamed protein product [Vitis vinifera]               59   5e-07
emb|CAN75366.1| hypothetical protein VITISV_030646 [Vitis vinifera]    59   5e-07
emb|CBI37831.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002278139.1| PREDICTED: G2/mitotic-specific cyclin-1-like...    57   1e-06

>ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]
          Length = 437

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -1

Query: 182 NQDKSIVKTLQFNMSVPTPYVLMRRFLKASQSDKK 78
           + +K +V TLQFNMSVPTPYV MRRFLKA+QSDKK
Sbjct: 295 DMEKLMVNTLQFNMSVPTPYVFMRRFLKAAQSDKK 329


>emb|CBI19854.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -1

Query: 182 NQDKSIVKTLQFNMSVPTPYVLMRRFLKASQSDKK 78
           + +K +V TLQFNMSVPTPYV MRRFLKA+QSDKK
Sbjct: 299 DMEKLMVNTLQFNMSVPTPYVFMRRFLKAAQSDKK 333


>emb|CAN75366.1| hypothetical protein VITISV_030646 [Vitis vinifera]
          Length = 1049

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -1

Query: 182  NQDKSIVKTLQFNMSVPTPYVLMRRFLKASQSDKK 78
            + +K +V TLQFNMSVPTPYV MRRFLKA+QSDKK
Sbjct: 955  DMEKLMVNTLQFNMSVPTPYVFMRRFLKAAQSDKK 989


>emb|CBI37831.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -1

Query: 182 NQDKSIVKTLQFNMSVPTPYVLMRRFLKASQSDKK 78
           + +K +V TLQFNMSVPTPYV MRRFLKA+QSD+K
Sbjct: 287 DMEKVMVNTLQFNMSVPTPYVFMRRFLKAAQSDRK 321


>ref|XP_002278139.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Vitis vinifera]
          Length = 373

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -1

Query: 182 NQDKSIVKTLQFNMSVPTPYVLMRRFLKASQSDKK 78
           + +K +V TLQFNMSVPTPYV MRRFLKA+QSD+K
Sbjct: 236 DMEKVMVNTLQFNMSVPTPYVFMRRFLKAAQSDRK 270


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