BLASTX nr result

ID: Coptis21_contig00023925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023925
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527314.1| zinc finger protein, putative [Ricinus commu...   215   1e-53
emb|CBI21086.3| unnamed protein product [Vitis vinifera]              213   9e-53
ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis...   213   9e-53
emb|CAN74885.1| hypothetical protein VITISV_000223 [Vitis vinifera]   211   3e-52
ref|XP_002272545.1| PREDICTED: zinc finger protein 1-like [Vitis...   210   4e-52

>ref|XP_002527314.1| zinc finger protein, putative [Ricinus communis]
           gi|223533314|gb|EEF35066.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 280

 Score =  215 bits (548), Expect = 1e-53
 Identities = 120/197 (60%), Positives = 139/197 (70%), Gaps = 5/197 (2%)
 Frame = +2

Query: 272 ELNLIDCFNLGPSQKSL--DALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTI 445
           ELNLID F+LGPSQKSL  +     E+EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+
Sbjct: 77  ELNLIDTFDLGPSQKSLSDNPHQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 136

Query: 446 AKRGQRLGAAAAAFGYNSXXXXXXXXXXXXXNPYSSLASLPLHGSCNRSLGIQVHSMIQK 625
           AKRGQR+ AA+ A G++              N YSS+ASLPLHGS NRSLGIQVHSMI K
Sbjct: 137 AKRGQRISAASFALGHH---------HHSHLNRYSSMASLPLHGSLNRSLGIQVHSMIHK 187

Query: 626 PFYVPSS---SSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQQSRSGAARFD 796
           P ++ SS   SSN  LYG  GWSR P + QP +GRLA+ E +  G      S +G ARF+
Sbjct: 188 PTFIQSSILGSSN--LYGQNGWSRQPFDQQPAVGRLAS-ESFHMG----SPSGNGVARFE 240

Query: 797 TARKLGPNDEGIGGYRW 847
           +ARK  P  EGIGGY W
Sbjct: 241 SARKFSPVREGIGGYWW 257


>emb|CBI21086.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  213 bits (541), Expect = 9e-53
 Identities = 118/209 (56%), Positives = 136/209 (65%), Gaps = 6/209 (2%)
 Frame = +2

Query: 272 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 451
           ELNLIDC N   SQ S +     ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 44  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 103

Query: 452 RGQRLG----AAAAAFGYNSXXXXXXXXXXXXXNPYSSLASLPLHGSCNRSLGIQVHSMI 619
           RGQRLG    AAA AFG+                 YSS+ASLPLHG+ NRSLGIQVHSMI
Sbjct: 104 RGQRLGAPMVAAATAFGH----------PYFHHQHYSSMASLPLHGAYNRSLGIQVHSMI 153

Query: 620 QKPFYVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQQSRSGAARFDT 799
            KP     SS +  LYGH  WSRPPI+ QP +GRL A+E    G++    SR G  RFDT
Sbjct: 154 HKPSLTTPSSGSGNLYGHRSWSRPPIDQQPAVGRL-AVENCHEGVTAGPLSRGGIGRFDT 212

Query: 800 ARKL--GPNDEGIGGYRWAATGSNQPKNN 880
            R +     +EGIGG+ W  TG  + K N
Sbjct: 213 VRMMINSQANEGIGGFCW--TGGGRLKTN 239


>ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis vinifera]
          Length = 286

 Score =  213 bits (541), Expect = 9e-53
 Identities = 118/209 (56%), Positives = 136/209 (65%), Gaps = 6/209 (2%)
 Frame = +2

Query: 272 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 451
           ELNLIDC N   SQ S +     ++EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 78  ELNLIDCLNTDSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 137

Query: 452 RGQRLG----AAAAAFGYNSXXXXXXXXXXXXXNPYSSLASLPLHGSCNRSLGIQVHSMI 619
           RGQRLG    AAA AFG+                 YSS+ASLPLHG+ NRSLGIQVHSMI
Sbjct: 138 RGQRLGAPMVAAATAFGH----------PYFHHQHYSSMASLPLHGAYNRSLGIQVHSMI 187

Query: 620 QKPFYVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQQSRSGAARFDT 799
            KP     SS +  LYGH  WSRPPI+ QP +GRL A+E    G++    SR G  RFDT
Sbjct: 188 HKPSLTTPSSGSGNLYGHRSWSRPPIDQQPAVGRL-AVENCHEGVTAGPLSRGGIGRFDT 246

Query: 800 ARKL--GPNDEGIGGYRWAATGSNQPKNN 880
            R +     +EGIGG+ W  TG  + K N
Sbjct: 247 VRMMINSQANEGIGGFCW--TGGGRLKTN 273


>emb|CAN74885.1| hypothetical protein VITISV_000223 [Vitis vinifera]
          Length = 267

 Score =  211 bits (536), Expect = 3e-52
 Identities = 122/206 (59%), Positives = 135/206 (65%), Gaps = 3/206 (1%)
 Frame = +2

Query: 272 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 451
           ELNLI+ F +G SQ   +     E EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 72  ELNLINSFEMGSSQNQSEIPQGNEGEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 131

Query: 452 RGQRLGAAAAAFGYNSXXXXXXXXXXXXXNPY--SSLASLPLHGSCNRSLGIQVHSMIQK 625
           RGQR+GAA+ AFG+               NPY  SS+ASLPLHGS NRSLGIQ HS+I K
Sbjct: 132 RGQRIGAASVAFGH------------PLPNPYRFSSMASLPLHGSFNRSLGIQAHSLIHK 179

Query: 626 PFYVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQQSRSGAARFDTAR 805
           P     SS +  LYGH GWSR PI+ QP IGRLA  E Y  G S    S  GAARF+T R
Sbjct: 180 P-----SSLSSTLYGHQGWSRLPIDQQPAIGRLAP-ENYHVGSS---SSSGGAARFETVR 230

Query: 806 KLG-PNDEGIGGYRWAATGSNQPKNN 880
           K   P  EGIGGY W    SN  K N
Sbjct: 231 KFSRPASEGIGGYWW--NNSNNLKMN 254


>ref|XP_002272545.1| PREDICTED: zinc finger protein 1-like [Vitis vinifera]
          Length = 267

 Score =  210 bits (535), Expect = 4e-52
 Identities = 122/206 (59%), Positives = 135/206 (65%), Gaps = 3/206 (1%)
 Frame = +2

Query: 272 ELNLIDCFNLGPSQKSLDALNAIESEPRVFSCNFCQRKFYSSQALGGHQNAHKRERTIAK 451
           ELNLI+ F +G SQ   +     E EPRVFSCN+CQRKFYSSQALGGHQNAHKRERT+AK
Sbjct: 72  ELNLINSFEMGSSQNHSEIPQGNEGEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 131

Query: 452 RGQRLGAAAAAFGYNSXXXXXXXXXXXXXNPY--SSLASLPLHGSCNRSLGIQVHSMIQK 625
           RGQR+GAA+ AFG+               NPY  SS+ASLPLHGS NRSLGIQ HS+I K
Sbjct: 132 RGQRIGAASVAFGH------------PLPNPYRFSSMASLPLHGSFNRSLGIQAHSLIHK 179

Query: 626 PFYVPSSSSNPYLYGHPGWSRPPIEPQPTIGRLAAMEKYRSGMSVEQQSRSGAARFDTAR 805
           P     SS +  LYGH GWSR PI+ QP IGRLA  E Y  G S    S  GAARF+T R
Sbjct: 180 P-----SSLSSTLYGHQGWSRLPIDQQPAIGRLAP-ENYHVGSS---SSSGGAARFETVR 230

Query: 806 KLG-PNDEGIGGYRWAATGSNQPKNN 880
           K   P  EGIGGY W    SN  K N
Sbjct: 231 KFSRPASEGIGGYWW--NNSNNLKMN 254


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