BLASTX nr result

ID: Coptis21_contig00023923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023923
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302700.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-08

>ref|XP_002302700.1| predicted protein [Populus trichocarpa] gi|222844426|gb|EEE81973.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
 Frame = -2

Query: 830 MDVSVKKLSTNYNEGVETFN---VMIGDRRMLSIFTSSESVMSKWLSDMRKT------TK 678
           M+++V+ +  +  +    +N   + + + R+L++ +  +  +SKW+  + KT      + 
Sbjct: 1   MEITVEMIKESLKDPYYHYNGYTIHVENHRILTVISGCDLTVSKWIKHVSKTNNDSASSS 60

Query: 677 KKETLIVGFRAYRR---------NYNSPYKILTLCIGSQCLIYEVPGKKNGSVRQRQQHS 525
            K++LIVG    ++         NY  PY IL  C+GS CLIY +P  +          S
Sbjct: 61  SKKSLIVGVSTDKQYISGSKGSENY-CPYNILPRCVGSHCLIYHLPHPE----CYHTCKS 115

Query: 524 LQDFLSDSKTXXXXXXXXXXVNKLEEDEILK----VDGKSVDIRLLGENFLGLSKDSVKK 357
           L+DF S+ K             +LE++  +K    +D   + ++ +G+  L L   +V K
Sbjct: 116 LRDFFSNPKVIAVGVSIKPVAKQLEKEFEIKFEKVIDVHELAVKKIGQELLDL---NVSK 172

Query: 356 XXXXXXXXXXLGKHFDIIR 300
                     LGKH D++R
Sbjct: 173 FDLDNMAKALLGKHMDVVR 191


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