BLASTX nr result

ID: Coptis21_contig00023920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023920
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17075.1| unknown [Picea sitchensis]                              66   3e-09
ref|NP_001062080.1| Os08g0484200 [Oryza sativa Japonica Group] g...    63   3e-08
gb|EAZ43121.1| hypothetical protein OsJ_27711 [Oryza sativa Japo...    63   3e-08
ref|XP_003572301.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    62   4e-08
tpg|DAA47756.1| TPA: putative RING zinc finger domain superfamil...    61   1e-07

>gb|ABR17075.1| unknown [Picea sitchensis]
          Length = 466

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -1

Query: 126 GLPANFNPSMAIIIIVLISAFFFMGFFSIYIRQCAGE 16
           GL   FNPSMAIII+VL+SAFFFMGFFSIY+R+CAGE
Sbjct: 57  GLNNRFNPSMAIIIVVLLSAFFFMGFFSIYVRRCAGE 93


>ref|NP_001062080.1| Os08g0484200 [Oryza sativa Japonica Group]
           gi|42408167|dbj|BAD09305.1| putative RING-H2 zinc finger
           protein [Oryza sativa Japonica Group]
           gi|42409391|dbj|BAD10704.1| putative RING-H2 zinc finger
           protein [Oryza sativa Japonica Group]
           gi|113624049|dbj|BAF23994.1| Os08g0484200 [Oryza sativa
           Japonica Group] gi|125561949|gb|EAZ07397.1| hypothetical
           protein OsI_29648 [Oryza sativa Indica Group]
           gi|215768935|dbj|BAH01164.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 413

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/37 (70%), Positives = 34/37 (91%)
 Frame = -1

Query: 129 YGLPANFNPSMAIIIIVLISAFFFMGFFSIYIRQCAG 19
           Y  P +FNPSMA++I+VL++AFFF+GFFSIYIR+CAG
Sbjct: 45  YFNPKSFNPSMAVVIVVLVTAFFFLGFFSIYIRRCAG 81


>gb|EAZ43121.1| hypothetical protein OsJ_27711 [Oryza sativa Japonica Group]
          Length = 280

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/37 (70%), Positives = 34/37 (91%)
 Frame = -1

Query: 129 YGLPANFNPSMAIIIIVLISAFFFMGFFSIYIRQCAG 19
           Y  P +FNPSMA++I+VL++AFFF+GFFSIYIR+CAG
Sbjct: 45  YFNPKSFNPSMAVVIVVLVTAFFFLGFFSIYIRRCAG 81


>ref|XP_003572301.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Brachypodium
           distachyon]
          Length = 435

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/37 (70%), Positives = 34/37 (91%)
 Frame = -1

Query: 129 YGLPANFNPSMAIIIIVLISAFFFMGFFSIYIRQCAG 19
           Y  P +FNPSMA+II+VL++AFFF+GFFSIY+R+CAG
Sbjct: 47  YFNPQSFNPSMAVIIVVLVTAFFFLGFFSIYLRRCAG 83


>tpg|DAA47756.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 377

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = -1

Query: 129 YGLPANFNPSMAIIIIVLISAFFFMGFFSIYIRQCAG 19
           Y  P NFNPSMAI+++VL++AFF +GFFSIY+R+CAG
Sbjct: 31  YFNPKNFNPSMAIVMVVLVTAFFLLGFFSIYLRRCAG 67


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