BLASTX nr result

ID: Coptis21_contig00023895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023895
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 ho...    78   6e-13
ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...    75   4e-12
ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho...    75   5e-12
ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...    74   9e-12
ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 ho...    71   1e-10

>ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus]
           gi|449487740|ref|XP_004157777.1| PREDICTED: pachytene
           checkpoint protein 2 homolog [Cucumis sativus]
          Length = 456

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/57 (70%), Positives = 44/57 (77%)
 Frame = +1

Query: 40  SQSSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210
           S  S     +NEDKI VSVEVCLK SSTARI DV+ AVERMLE+RSLSY DGP+ VP
Sbjct: 25  SSESAASSIVNEDKILVSVEVCLKSSSTARIEDVRLAVERMLEKRSLSYVDGPIPVP 81


>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/52 (67%), Positives = 42/52 (80%)
 Frame = +1

Query: 55  PLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210
           P P ++ DK  VSVEVCLK SSTAR+ D++ AVERMLE+RSLSY DGP+ VP
Sbjct: 34  PSPILHHDKYLVSVEVCLKPSSTARVEDIQSAVERMLEKRSLSYVDGPIPVP 85


>ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera]
           gi|297733699|emb|CBI14946.3| unnamed protein product
           [Vitis vinifera]
          Length = 455

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = +1

Query: 28  EQMSSQSSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSV 207
           +Q     S+P P + ++K+ VSVEVCLK SSTAR  DV+ AVERMLE RSLSYTDG V V
Sbjct: 19  DQNGVSESIPSPILTQEKVLVSVEVCLKASSTARSDDVRSAVERMLENRSLSYTDGSVPV 78


>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/55 (67%), Positives = 42/55 (76%)
 Frame = +1

Query: 46  SSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210
           SS P P +   K  VSVEVCLK SSTAR+ DV+ AVERMLE+RSLSY DGP+ VP
Sbjct: 35  SSSPSPILTHRKFLVSVEVCLKPSSTARVEDVRLAVERMLEKRSLSYVDGPIPVP 89


>ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max]
          Length = 448

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +1

Query: 37  SSQSSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210
           SSQ SL +P   EDK+ V VEV LK+SSTA+I DV+ AVE MLE+RSLSY DGP+ VP
Sbjct: 17  SSQHSLSVP---EDKVLVPVEVTLKLSSTAKIDDVRSAVEGMLEKRSLSYNDGPIPVP 71


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