BLASTX nr result
ID: Coptis21_contig00023895
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023895 (210 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 ho... 78 6e-13 ref|XP_002511315.1| thyroid hormone receptor interactor, putativ... 75 4e-12 ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho... 75 5e-12 ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1... 74 9e-12 ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 ho... 71 1e-10 >ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus] gi|449487740|ref|XP_004157777.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus] Length = 456 Score = 78.2 bits (191), Expect = 6e-13 Identities = 40/57 (70%), Positives = 44/57 (77%) Frame = +1 Query: 40 SQSSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210 S S +NEDKI VSVEVCLK SSTARI DV+ AVERMLE+RSLSY DGP+ VP Sbjct: 25 SSESAASSIVNEDKILVSVEVCLKSSSTARIEDVRLAVERMLEKRSLSYVDGPIPVP 81 >ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis] gi|223550430|gb|EEF51917.1| thyroid hormone receptor interactor, putative [Ricinus communis] Length = 460 Score = 75.5 bits (184), Expect = 4e-12 Identities = 35/52 (67%), Positives = 42/52 (80%) Frame = +1 Query: 55 PLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210 P P ++ DK VSVEVCLK SSTAR+ D++ AVERMLE+RSLSY DGP+ VP Sbjct: 34 PSPILHHDKYLVSVEVCLKPSSTARVEDIQSAVERMLEKRSLSYVDGPIPVP 85 >ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera] gi|297733699|emb|CBI14946.3| unnamed protein product [Vitis vinifera] Length = 455 Score = 75.1 bits (183), Expect = 5e-12 Identities = 37/60 (61%), Positives = 44/60 (73%) Frame = +1 Query: 28 EQMSSQSSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSV 207 +Q S+P P + ++K+ VSVEVCLK SSTAR DV+ AVERMLE RSLSYTDG V V Sbjct: 19 DQNGVSESIPSPILTQEKVLVSVEVCLKASSTARSDDVRSAVERMLENRSLSYTDGSVPV 78 >ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1| unknown [Populus trichocarpa] gi|222858748|gb|EEE96295.1| predicted protein [Populus trichocarpa] Length = 465 Score = 74.3 bits (181), Expect = 9e-12 Identities = 37/55 (67%), Positives = 42/55 (76%) Frame = +1 Query: 46 SSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210 SS P P + K VSVEVCLK SSTAR+ DV+ AVERMLE+RSLSY DGP+ VP Sbjct: 35 SSSPSPILTHRKFLVSVEVCLKPSSTARVEDVRLAVERMLEKRSLSYVDGPIPVP 89 >ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max] Length = 448 Score = 70.9 bits (172), Expect = 1e-10 Identities = 38/58 (65%), Positives = 45/58 (77%) Frame = +1 Query: 37 SSQSSLPLPFINEDKISVSVEVCLKVSSTARISDVKEAVERMLEQRSLSYTDGPVSVP 210 SSQ SL +P EDK+ V VEV LK+SSTA+I DV+ AVE MLE+RSLSY DGP+ VP Sbjct: 17 SSQHSLSVP---EDKVLVPVEVTLKLSSTAKIDDVRSAVEGMLEKRSLSYNDGPIPVP 71