BLASTX nr result

ID: Coptis21_contig00023866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023866
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604042.1| MCM10-like protein [Medicago truncatula] gi|...   104   9e-21
ref|XP_002313710.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
emb|CBI37876.3| unnamed protein product [Vitis vinifera]              101   6e-20
ref|XP_002277777.1| PREDICTED: uncharacterized protein LOC100250...   101   6e-20
emb|CAN73626.1| hypothetical protein VITISV_026638 [Vitis vinifera]   101   6e-20

>ref|XP_003604042.1| MCM10-like protein [Medicago truncatula]
           gi|355493090|gb|AES74293.1| MCM10-like protein [Medicago
           truncatula]
          Length = 412

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +3

Query: 3   YTKNCKESVGTVFALFNASVRKDAKSGGFSLSVFSSNQITKMGTSVDYGVCKAKRKDGVS 182
           Y +NC+E  GTVFALFN++VRKDAK  GFSLS++S NQI KMGTSVDYGVCK KR DG+S
Sbjct: 172 YQRNCQEKEGTVFALFNSTVRKDAKGNGFSLSIYSPNQIMKMGTSVDYGVCKGKRADGMS 231

Query: 183 CNMVIN 200
           C + IN
Sbjct: 232 CTLAIN 237


>ref|XP_002313710.1| predicted protein [Populus trichocarpa] gi|222850118|gb|EEE87665.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/66 (72%), Positives = 54/66 (81%)
 Frame = +3

Query: 3   YTKNCKESVGTVFALFNASVRKDAKSGGFSLSVFSSNQITKMGTSVDYGVCKAKRKDGVS 182
           Y +NCKE  GTVFALFN +VRKD    GFSLSVFS+NQI KMGTS+DYGVCK KRKDG+ 
Sbjct: 177 YQQNCKEQAGTVFALFNCTVRKDNVGTGFSLSVFSANQILKMGTSIDYGVCKGKRKDGLP 236

Query: 183 CNMVIN 200
           C +VIN
Sbjct: 237 CTLVIN 242


>emb|CBI37876.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = +3

Query: 3   YTKNCKESVGTVFALFNASVRKDAKSGGFSLSVFSSNQITKMGTSVDYGVCKAKRKDGVS 182
           Y KN KE  GTVFALFN SVRKDA   GFSLSV+S  QI K+GTSVDYGVCK KRKDG++
Sbjct: 163 YQKNWKEQAGTVFALFNCSVRKDAMGNGFSLSVYSPGQILKLGTSVDYGVCKGKRKDGMA 222

Query: 183 CNMVIN 200
           C +VIN
Sbjct: 223 CTLVIN 228


>ref|XP_002277777.1| PREDICTED: uncharacterized protein LOC100250259 [Vitis vinifera]
          Length = 403

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = +3

Query: 3   YTKNCKESVGTVFALFNASVRKDAKSGGFSLSVFSSNQITKMGTSVDYGVCKAKRKDGVS 182
           Y KN KE  GTVFALFN SVRKDA   GFSLSV+S  QI K+GTSVDYGVCK KRKDG++
Sbjct: 167 YQKNWKEQAGTVFALFNCSVRKDAMGNGFSLSVYSPGQILKLGTSVDYGVCKGKRKDGMA 226

Query: 183 CNMVIN 200
           C +VIN
Sbjct: 227 CTLVIN 232


>emb|CAN73626.1| hypothetical protein VITISV_026638 [Vitis vinifera]
          Length = 313

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = +3

Query: 3   YTKNCKESVGTVFALFNASVRKDAKSGGFSLSVFSSNQITKMGTSVDYGVCKAKRKDGVS 182
           Y KN KE  GTVFALFN SVRKDA   GFSLSV+S  QI K+GTSVDYGVCK KRKDG++
Sbjct: 121 YQKNWKEQAGTVFALFNCSVRKDAMGNGFSLSVYSPGQILKLGTSVDYGVCKGKRKDGMA 180

Query: 183 CNMVIN 200
           C +VIN
Sbjct: 181 CTLVIN 186


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