BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023859
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...    70   2e-10
ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|3326...    68   7e-10
ref|NP_191459.2| F-box protein [Arabidopsis thaliana] gi|1429892...    68   7e-10
emb|CAB86928.1| putative protein [Arabidopsis thaliana]                68   7e-10
ref|XP_003592943.1| F-box/LRR-repeat protein [Medicago truncatul...    68   9e-10

>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +2

Query: 98  EGQNDGNGEDRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNL 253
           E Q++   EDR S+LP+ IILHILSFL+TKHVV T V S RWR+LW  +P L
Sbjct: 26  ENQSNEESEDRLSDLPDGIILHILSFLNTKHVVRTCVLSKRWRHLWKRIPTL 77


>ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|332646338|gb|AEE79859.1|
           F-box protein [Arabidopsis thaliana]
          Length = 345

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = +2

Query: 125 DRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNLGFCDVHLFHPNIWR--N 298
           DR  +LP+ ++ HILSFL TK   LTS+ S RWRYL   VPNL F D+   HP   +   
Sbjct: 2   DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61

Query: 299 PEYENKFMNFV 331
            E    FM+FV
Sbjct: 62  DEIRQSFMDFV 72


>ref|NP_191459.2| F-box protein [Arabidopsis thaliana]
           gi|142989252|sp|Q2V3N5.2|FB211_ARATH RecName: Full=F-box
           protein At3g59000 gi|145651800|gb|ABP88125.1| At3g59000
           [Arabidopsis thaliana] gi|332646337|gb|AEE79858.1| F-box
           protein [Arabidopsis thaliana]
          Length = 491

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = +2

Query: 125 DRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNLGFCDVHLFHPNIWR--N 298
           DR  +LP+ ++ HILSFL TK   LTS+ S RWRYL   VPNL F D+   HP   +   
Sbjct: 2   DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61

Query: 299 PEYENKFMNFV 331
            E    FM+FV
Sbjct: 62  DEIRQSFMDFV 72


>emb|CAB86928.1| putative protein [Arabidopsis thaliana]
          Length = 461

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = +2

Query: 125 DRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNLGFCDVHLFHPNIWR--N 298
           DR  +LP+ ++ HILSFL TK   LTS+ S RWRYL   VPNL F D+   HP   +   
Sbjct: 2   DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61

Query: 299 PEYENKFMNFV 331
            E    FM+FV
Sbjct: 62  DEIRQSFMDFV 72


>ref|XP_003592943.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355481991|gb|AES63194.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 375

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/69 (46%), Positives = 43/69 (62%)
 Frame = +2

Query: 125 DRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNLGFCDVHLFHPNIWRNPE 304
           DR  +LP+ I++HILSF+ TK   +TS+ S RW +LW  VPNL F D  L      +N E
Sbjct: 11  DRIGSLPDEILIHILSFVPTKQAFVTSILSKRWTHLWCFVPNLDFSDTKL------KNGE 64

Query: 305 YENKFMNFV 331
             ++F NFV
Sbjct: 65  DSSRFSNFV 73