BLASTX nr result

ID: Coptis21_contig00023853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023853
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279687.1| PREDICTED: omega-amidase NIT2-like [Vitis vi...    96   2e-18
emb|CBI20702.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002871509.1| carbon-nitrogen hydrolase family protein [Ar...    94   9e-18
ref|NP_974769.1| omega-amidase [Arabidopsis thaliana] gi|3320043...    94   1e-17
ref|NP_196765.2| omega-amidase [Arabidopsis thaliana] gi|1971557...    94   1e-17

>ref|XP_002279687.1| PREDICTED: omega-amidase NIT2-like [Vitis vinifera]
          Length = 364

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/62 (77%), Positives = 52/62 (83%)
 Frame = +2

Query: 26  SGMASSFKPGQARVPPAIELPKPPLTKYKIALCQLSVTEDKARNIAHARKAIEEAAGKGA 205
           + M+SSFKP QARVPPAI  P PPL+K+KI LCQLSVT DK RNIAHARKAIEEA  KGA
Sbjct: 56  ASMSSSFKPEQARVPPAIPPPTPPLSKFKIGLCQLSVTADKERNIAHARKAIEEAVEKGA 115

Query: 206 QL 211
           QL
Sbjct: 116 QL 117


>emb|CBI20702.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/60 (80%), Positives = 51/60 (85%)
 Frame = +2

Query: 32  MASSFKPGQARVPPAIELPKPPLTKYKIALCQLSVTEDKARNIAHARKAIEEAAGKGAQL 211
           M+SSFKP QARVPPAI  P PPL+K+KI LCQLSVT DK RNIAHARKAIEEA  KGAQL
Sbjct: 1   MSSSFKPEQARVPPAIPPPTPPLSKFKIGLCQLSVTADKERNIAHARKAIEEAVEKGAQL 60


>ref|XP_002871509.1| carbon-nitrogen hydrolase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317346|gb|EFH47768.1| carbon-nitrogen
           hydrolase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 365

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/62 (74%), Positives = 52/62 (83%)
 Frame = +2

Query: 26  SGMASSFKPGQARVPPAIELPKPPLTKYKIALCQLSVTEDKARNIAHARKAIEEAAGKGA 205
           S MASSF+P QARVP A+ LP PPLTK+ I LCQLSVT DK RNI+HA+KAIEEAA KGA
Sbjct: 57  SSMASSFQPEQARVPSALPLPAPPLTKFNIGLCQLSVTSDKKRNISHAKKAIEEAASKGA 116

Query: 206 QL 211
           +L
Sbjct: 117 KL 118


>ref|NP_974769.1| omega-amidase [Arabidopsis thaliana] gi|332004370|gb|AED91753.1|
           omega-amidase [Arabidopsis thaliana]
          Length = 294

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/62 (74%), Positives = 51/62 (82%)
 Frame = +2

Query: 26  SGMASSFKPGQARVPPAIELPKPPLTKYKIALCQLSVTEDKARNIAHARKAIEEAAGKGA 205
           S MASSF P QARVP A+ LP PPLTK+ I LCQLSVT DK RNI+HA+KAIEEAA KGA
Sbjct: 61  SSMASSFNPEQARVPSALPLPAPPLTKFNIGLCQLSVTSDKKRNISHAKKAIEEAASKGA 120

Query: 206 QL 211
           +L
Sbjct: 121 KL 122


>ref|NP_196765.2| omega-amidase [Arabidopsis thaliana] gi|19715574|gb|AAL91613.1|
           AT5g12040/F14F18_210 [Arabidopsis thaliana]
           gi|20147243|gb|AAM10335.1| AT5g12040/F14F18_210
           [Arabidopsis thaliana] gi|332004371|gb|AED91754.1|
           omega-amidase [Arabidopsis thaliana]
          Length = 369

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/62 (74%), Positives = 51/62 (82%)
 Frame = +2

Query: 26  SGMASSFKPGQARVPPAIELPKPPLTKYKIALCQLSVTEDKARNIAHARKAIEEAAGKGA 205
           S MASSF P QARVP A+ LP PPLTK+ I LCQLSVT DK RNI+HA+KAIEEAA KGA
Sbjct: 61  SSMASSFNPEQARVPSALPLPAPPLTKFNIGLCQLSVTSDKKRNISHAKKAIEEAASKGA 120

Query: 206 QL 211
           +L
Sbjct: 121 KL 122


Top