BLASTX nr result

ID: Coptis21_contig00023848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023848
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [...   170   1e-40
ref|XP_003543135.1| PREDICTED: dynamin-related protein 3A-like [...   167   1e-39
emb|CBI38239.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_003545730.1| PREDICTED: dynamin-related protein 3A-like [...   166   2e-39
ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39

>ref|XP_002269774.2| PREDICTED: dynamin-related protein 3A-like [Vitis vinifera]
          Length = 831

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/97 (86%), Positives = 91/97 (93%)
 Frame = +3

Query: 3   ICTRRPLVLQLLQTKRKPDGTAGEEYGEFLHLKNQKFYDFEEIRKEIQAETDREAGANKG 182
           ICTRRPLVLQLLQTKR+PDG+  EEYGEFLHL  +KF+DF EIR+EIQAETDREAG NKG
Sbjct: 78  ICTRRPLVLQLLQTKRRPDGSE-EEYGEFLHLPGKKFFDFSEIRREIQAETDREAGENKG 136

Query: 183 VSDRQIRLKIYSPNVLDITLVDLPGITKVPVGDQPSD 293
           VSD+QIRLKI+SPNVLDITLVDLPGITKVPVGDQPSD
Sbjct: 137 VSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSD 173


>ref|XP_003543135.1| PREDICTED: dynamin-related protein 3A-like [Glycine max]
          Length = 826

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/97 (83%), Positives = 89/97 (91%)
 Frame = +3

Query: 3   ICTRRPLVLQLLQTKRKPDGTAGEEYGEFLHLKNQKFYDFEEIRKEIQAETDREAGANKG 182
           ICTRRPLVLQL+QTKRKP+    +EYGEFLHL  +KF+DF EIR+EIQAETDREAG NKG
Sbjct: 76  ICTRRPLVLQLVQTKRKPNLDNNDEYGEFLHLPGRKFHDFSEIRREIQAETDREAGGNKG 135

Query: 183 VSDRQIRLKIYSPNVLDITLVDLPGITKVPVGDQPSD 293
           VSD+QIRLKI+SPNVLDITLVDLPGITKVPVGDQPSD
Sbjct: 136 VSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSD 172


>emb|CBI38239.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/97 (84%), Positives = 90/97 (92%)
 Frame = +3

Query: 3   ICTRRPLVLQLLQTKRKPDGTAGEEYGEFLHLKNQKFYDFEEIRKEIQAETDREAGANKG 182
           +CTRRPLVLQLLQTK+KPDG+  EEYGEFLHL  +KF+DF EI +EIQAETDREAG NKG
Sbjct: 166 VCTRRPLVLQLLQTKQKPDGS-DEEYGEFLHLPGKKFFDFLEIHREIQAETDREAGENKG 224

Query: 183 VSDRQIRLKIYSPNVLDITLVDLPGITKVPVGDQPSD 293
           VSD+QIRLKI+SPNVLDITLVDLPGITKVPVGDQPSD
Sbjct: 225 VSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSD 261


>ref|XP_003545730.1| PREDICTED: dynamin-related protein 3A-like [Glycine max]
          Length = 823

 Score =  166 bits (420), Expect = 2e-39
 Identities = 82/97 (84%), Positives = 89/97 (91%)
 Frame = +3

Query: 3   ICTRRPLVLQLLQTKRKPDGTAGEEYGEFLHLKNQKFYDFEEIRKEIQAETDREAGANKG 182
           ICTRRPLVLQL+QTKRKPD    +EYGEFLHL  +KF+DF EIR+EIQAETDREAG NKG
Sbjct: 76  ICTRRPLVLQLVQTKRKPDN---DEYGEFLHLPGRKFHDFSEIRREIQAETDREAGGNKG 132

Query: 183 VSDRQIRLKIYSPNVLDITLVDLPGITKVPVGDQPSD 293
           VSD+QIRLKI+SPNVLDITLVDLPGITKVPVGDQPSD
Sbjct: 133 VSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSD 169


>ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|222837325|gb|EEE75704.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/97 (83%), Positives = 87/97 (89%)
 Frame = +3

Query: 3   ICTRRPLVLQLLQTKRKPDGTAGEEYGEFLHLKNQKFYDFEEIRKEIQAETDREAGANKG 182
           ICTRRPLVLQLLQTKRK DG   EE+GEFLHL  ++FYDF EIR EIQAET +EAG NKG
Sbjct: 83  ICTRRPLVLQLLQTKRKGDGCGEEEWGEFLHLPGKRFYDFSEIRSEIQAETAKEAGGNKG 142

Query: 183 VSDRQIRLKIYSPNVLDITLVDLPGITKVPVGDQPSD 293
           VSD+QIRLKI+SPNVLDITLVDLPGITKVPVGDQPSD
Sbjct: 143 VSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPSD 179


Top