BLASTX nr result

ID: Coptis21_contig00023830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023830
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267174.1| PREDICTED: digestive organ expansion factor ...   131   5e-29
ref|XP_002892963.1| hypothetical protein ARALYDRAFT_471979 [Arab...   131   6e-29
gb|AAF99813.1|AC034257_5 Hypothetical protein [Arabidopsis thali...   128   5e-28
ref|NP_564032.1| uncharacterized protein [Arabidopsis thaliana] ...   128   5e-28
gb|AAL07149.1| unknown protein [Arabidopsis thaliana]                 128   5e-28

>ref|XP_002267174.1| PREDICTED: digestive organ expansion factor homolog [Vitis
           vinifera] gi|296090307|emb|CBI40126.3| unnamed protein
           product [Vitis vinifera]
          Length = 753

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/89 (74%), Positives = 73/89 (82%)
 Frame = +3

Query: 3   RPFYRKGLEEDSSIMDGYIMHALNHVFRTRELVTKNEAKLAKLPEINKEESSNEGGFLDH 182
           +PFY KG EEDS IMD YIMHALNH+FRT +LVTKN++K+AK  E  KEE      FLDH
Sbjct: 279 KPFYLKGQEEDSCIMDAYIMHALNHIFRTGDLVTKNDSKVAKHQETVKEEILTGDSFLDH 338

Query: 183 GFTRPKVLILLPMASIAFRVVKRLIQLTP 269
           GFTRPKVLILLP+ASIA RVVKRLIQLTP
Sbjct: 339 GFTRPKVLILLPLASIALRVVKRLIQLTP 367


>ref|XP_002892963.1| hypothetical protein ARALYDRAFT_471979 [Arabidopsis lyrata subsp.
           lyrata] gi|297338805|gb|EFH69222.1| hypothetical protein
           ARALYDRAFT_471979 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/89 (69%), Positives = 76/89 (85%)
 Frame = +3

Query: 3   RPFYRKGLEEDSSIMDGYIMHALNHVFRTRELVTKNEAKLAKLPEINKEESSNEGGFLDH 182
           +PFY  G +EDSS MD Y+MH+LNH+F+TR+LV KNE+K+AK  EI++EE  ++ GFLD 
Sbjct: 275 KPFYHSGSDEDSSAMDAYLMHSLNHIFKTRDLVKKNESKIAKHREISEEEILSDDGFLDQ 334

Query: 183 GFTRPKVLILLPMASIAFRVVKRLIQLTP 269
           GFTRPKVLILLP+ SIAFRVVKRLIQLTP
Sbjct: 335 GFTRPKVLILLPLRSIAFRVVKRLIQLTP 363


>gb|AAF99813.1|AC034257_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 699

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/89 (68%), Positives = 75/89 (84%)
 Frame = +3

Query: 3   RPFYRKGLEEDSSIMDGYIMHALNHVFRTRELVTKNEAKLAKLPEINKEESSNEGGFLDH 182
           +PFY  G +EDSS MD Y+MH+LNH+F+TR+LV KNE+K+AK  E ++EE  ++ GFLD 
Sbjct: 281 KPFYHCGSDEDSSAMDAYLMHSLNHIFKTRDLVKKNESKIAKHRETSEEEILSDDGFLDQ 340

Query: 183 GFTRPKVLILLPMASIAFRVVKRLIQLTP 269
           GFTRPKVLILLP+ SIAFRVVKRLIQLTP
Sbjct: 341 GFTRPKVLILLPLRSIAFRVVKRLIQLTP 369


>ref|NP_564032.1| uncharacterized protein [Arabidopsis thaliana]
           gi|23297505|gb|AAN12983.1| unknown protein [Arabidopsis
           thaliana] gi|332191501|gb|AEE29622.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 754

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/89 (68%), Positives = 75/89 (84%)
 Frame = +3

Query: 3   RPFYRKGLEEDSSIMDGYIMHALNHVFRTRELVTKNEAKLAKLPEINKEESSNEGGFLDH 182
           +PFY  G +EDSS MD Y+MH+LNH+F+TR+LV KNE+K+AK  E ++EE  ++ GFLD 
Sbjct: 281 KPFYHCGSDEDSSAMDAYLMHSLNHIFKTRDLVKKNESKIAKHRETSEEEILSDDGFLDQ 340

Query: 183 GFTRPKVLILLPMASIAFRVVKRLIQLTP 269
           GFTRPKVLILLP+ SIAFRVVKRLIQLTP
Sbjct: 341 GFTRPKVLILLPLRSIAFRVVKRLIQLTP 369


>gb|AAL07149.1| unknown protein [Arabidopsis thaliana]
          Length = 754

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/89 (68%), Positives = 75/89 (84%)
 Frame = +3

Query: 3   RPFYRKGLEEDSSIMDGYIMHALNHVFRTRELVTKNEAKLAKLPEINKEESSNEGGFLDH 182
           +PFY  G +EDSS MD Y+MH+LNH+F+TR+LV KNE+K+AK  E ++EE  ++ GFLD 
Sbjct: 281 KPFYHCGSDEDSSAMDAYLMHSLNHIFKTRDLVKKNESKIAKHRETSEEEILSDDGFLDQ 340

Query: 183 GFTRPKVLILLPMASIAFRVVKRLIQLTP 269
           GFTRPKVLILLP+ SIAFRVVKRLIQLTP
Sbjct: 341 GFTRPKVLILLPLRSIAFRVVKRLIQLTP 369


Top