BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023812
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   285   1e-74
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   276   6e-72
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...   270   5e-70
ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arab...   267   3e-69
ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis tha...   262   1e-67

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  285 bits (730), Expect = 1e-74
 Identities = 148/256 (57%), Positives = 189/256 (73%), Gaps = 2/256 (0%)
 Frame = +3

Query: 189 LNMDTDEP--RFHIIQPLKDPESNWAVDVAKNLEEYLIKICSGEVIGENDDHFSINFAEA 362
           L+ + ++P  + H +Q  +D E+NW VD+AK LE+YL+K+CSGE+   +DD+ S+NFAEA
Sbjct: 3   LHKEKEQPPKKIHTVQAERDLEANWDVDLAKKLEDYLLKLCSGEIT--SDDNVSVNFAEA 60

Query: 363 ALMLQGSVQVYSRKVEYLYTLVLHALEFLSQKRQQDQTEKTSGQSEGSGPKNVVDDDNEP 542
           AL+LQGSVQVYSRKVEYLY LVLHAL+FLSQKRQQ+QTE TS Q E +G     D++++ 
Sbjct: 61  ALLLQGSVQVYSRKVEYLYNLVLHALDFLSQKRQQEQTEGTSFQPEQNGSNAASDEESDQ 120

Query: 543 FLGLDEVPVETKNSLDDGHSKDDTSNLFGKPPANLVVLEGDCFDSIGDVGELESYLLATH 722
           F   D+VPVE +NSLD   SKDD+   F KPPANL+VLEGDC ++ GD GEL+SYLLAT+
Sbjct: 121 FWVSDDVPVEARNSLDASTSKDDSLYHFVKPPANLIVLEGDCLNTTGDGGELDSYLLATN 180

Query: 723 DLYRDFILLDPCDAGAVDKYLGEDKAFKGSNVASRGALSRSKTRKSSFQTPTRRSGGGLH 902
           DLYRDFILLDPCDA AV+ +   D+  KG N   +G+  R      SFQ+P+RRSGG   
Sbjct: 181 DLYRDFILLDPCDADAVNDFFNGDETGKGLNSTCKGSSPR-----KSFQSPSRRSGGTAR 235

Query: 903 KSSLGETLDGNLTRTP 950
           KSSLG+  D  L +TP
Sbjct: 236 KSSLGKNQDAKLNQTP 251


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  276 bits (706), Expect = 6e-72
 Identities = 150/265 (56%), Positives = 189/265 (71%), Gaps = 1/265 (0%)
 Frame = +3

Query: 189 LNMDTDEP-RFHIIQPLKDPESNWAVDVAKNLEEYLIKICSGEVIGENDDHFSINFAEAA 365
           ++ + +EP ++H +Q  +D E+NW VD++K LE+YL+KICSGE+ G  +D  ++NFAEAA
Sbjct: 2   ISNNKEEPSKYHTVQAERDLEANWEVDLSKKLEDYLLKICSGEIAGNEEDS-NVNFAEAA 60

Query: 366 LMLQGSVQVYSRKVEYLYTLVLHALEFLSQKRQQDQTEKTSGQSEGSGPKNVVDDDNEPF 545
           L+LQGSVQVYSRKVEYLY LVLHAL+FLSQKRQQ+Q+E  S Q E SG + V DDDN+ F
Sbjct: 61  LLLQGSVQVYSRKVEYLYNLVLHALDFLSQKRQQEQSEGASVQPEQSGSQAVSDDDNDQF 120

Query: 546 LGLDEVPVETKNSLDDGHSKDDTSNLFGKPPANLVVLEGDCFDSIGDVGELESYLLATHD 725
              D+VPVE +N LD   SKD +   F KPPANL+VLEGDC D+ GD GELESYLLAT+D
Sbjct: 121 WVSDDVPVEPRNYLDASTSKDASFYHFVKPPANLIVLEGDCLDTSGDGGELESYLLATND 180

Query: 726 LYRDFILLDPCDAGAVDKYLGEDKAFKGSNVASRGALSRSKTRKSSFQTPTRRSGGGLHK 905
           LYRDFILL+PCDA AV+ +L  D   K    A  G+   S TRK +FQ+PTR SGG  +K
Sbjct: 181 LYRDFILLNPCDAIAVNDFLKADDTRK----AQYGSYRGSSTRK-TFQSPTRCSGGTAYK 235

Query: 906 SSLGETLDGNLTRTPEISHNVEFND 980
            S G+  D N  + P      + ND
Sbjct: 236 PSFGKNRDANPMQPPVAGCGFQAND 260


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score =  270 bits (689), Expect = 5e-70
 Identities = 146/231 (63%), Positives = 175/231 (75%)
 Frame = +3

Query: 216 FHIIQPLKDPESNWAVDVAKNLEEYLIKICSGEVIGENDDHFSINFAEAALMLQGSVQVY 395
           FH +QPL+D ESNW+VD+AKNLEEYL+KICSGE+ G  +D  ++NFAEAAL+LQGS+QVY
Sbjct: 19  FHTVQPLRDLESNWSVDLAKNLEEYLLKICSGEISG--NDGRNVNFAEAALLLQGSIQVY 76

Query: 396 SRKVEYLYTLVLHALEFLSQKRQQDQTEKTSGQSEGSGPKNVVDDDNEPFLGLDEVPVET 575
           SRKVEYLYTLVLHALEF+S  RQQDQ E+T  Q E  G   V D++++ F  LD+VPVE 
Sbjct: 77  SRKVEYLYTLVLHALEFVSHTRQQDQLERTPIQHEEGGSHVVPDEEDDLFWCLDDVPVEP 136

Query: 576 KNSLDDGHSKDDTSNLFGKPPANLVVLEGDCFDSIGDVGELESYLLATHDLYRDFILLDP 755
           +N LD   SKD + N F K PANLVVLEG   D+ GD GEL+SYLLAT+DLYRDFILLDP
Sbjct: 137 RNCLDSTTSKDASLNQFVKAPANLVVLEG---DATGDGGELDSYLLATNDLYRDFILLDP 193

Query: 756 CDAGAVDKYLGEDKAFKGSNVASRGALSRSKTRKSSFQTPTRRSGGGLHKS 908
           CDA AVD +L  DK  KG N   +     SK+ K SFQ+P+RRSGG  H+S
Sbjct: 194 CDAVAVDSFLKGDKDSKGLNGDYKSGSLNSKSCK-SFQSPSRRSGGTAHRS 243


>ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arabidopsis lyrata subsp.
           lyrata] gi|297331004|gb|EFH61423.1| hypothetical protein
           ARALYDRAFT_897993 [Arabidopsis lyrata subsp. lyrata]
          Length = 683

 Score =  267 bits (683), Expect = 3e-69
 Identities = 139/247 (56%), Positives = 178/247 (72%), Gaps = 1/247 (0%)
 Frame = +3

Query: 213 RFHIIQPLKDPESNWAVDVAKNLEEYLIKICSGEVIG-ENDDHFSINFAEAALMLQGSVQ 389
           R H +QP +D  +NW VD+++ LEEYL+KICSGE+ G E D+   +NFAEAAL+LQGSVQ
Sbjct: 13  RIHTVQPERDLVANWEVDLSEKLEEYLLKICSGEITGNEEDEQIPVNFAEAALLLQGSVQ 72

Query: 390 VYSRKVEYLYTLVLHALEFLSQKRQQDQTEKTSGQSEGSGPKNVVDDDNEPFLGLDEVPV 569
           VYS+KVEYLY LVL  LEFLS++R Q+Q++ TS ++E S  + V +++N+ F  +D++PV
Sbjct: 73  VYSKKVEYLYNLVLRTLEFLSKQRDQEQSKGTSNEAEASSSRQVDEEENDLFWNVDDIPV 132

Query: 570 ETKNSLDDGHSKDDTSNLFGKPPANLVVLEGDCFDSIGDVGELESYLLATHDLYRDFILL 749
           +TKN LD     D   + F KPPANLVVLEGDC D+ GD GELESYLLAT  LYRDFILL
Sbjct: 133 DTKNRLDSSVGGDTCPSQFVKPPANLVVLEGDCLDTSGDGGELESYLLATTHLYRDFILL 192

Query: 750 DPCDAGAVDKYLGEDKAFKGSNVASRGALSRSKTRKSSFQTPTRRSGGGLHKSSLGETLD 929
           DPCDA AV+++LG+D A KG N A RG    S  RK SF +   RSGG   KSS+G+   
Sbjct: 193 DPCDAVAVNEFLGDDYAGKGKNNAHRG----SSVRK-SFHSSVGRSGGSARKSSVGKNQG 247

Query: 930 GNLTRTP 950
            N+  +P
Sbjct: 248 TNVNLSP 254


>ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis thaliana]
           gi|75274279|sp|Q9LUR0.1|CNDH2_ARATH RecName:
           Full=Condensin-2 complex subunit H2; AltName:
           Full=Chromosome-associated protein H2; Short=AtCAP-H2;
           AltName: Full=Non-SMC condensin II complex subunit H2;
           AltName: Full=Protein HYPERSENSITIVE TO EXCESS BORON 2;
           Short=Hypersensitive to excess B 2
           gi|11994628|dbj|BAB02765.1| unnamed protein product
           [Arabidopsis thaliana] gi|62533249|dbj|BAD95574.1|
           chromosoma associate protein subunit H2 [Arabidopsis
           thaliana] gi|110741945|dbj|BAE98913.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642337|gb|AEE75858.1| condensin-2 complex subunit
           H2 [Arabidopsis thaliana]
          Length = 683

 Score =  262 bits (669), Expect = 1e-67
 Identities = 137/247 (55%), Positives = 176/247 (71%), Gaps = 1/247 (0%)
 Frame = +3

Query: 213 RFHIIQPLKDPESNWAVDVAKNLEEYLIKICSGEVIG-ENDDHFSINFAEAALMLQGSVQ 389
           R H +QP +D  +NW VD+++ LEEYL+KICSGE+ G E D    +NFAEAAL+LQGSVQ
Sbjct: 13  RIHTVQPERDLVANWEVDLSEKLEEYLLKICSGEITGNEEDGQIPVNFAEAALLLQGSVQ 72

Query: 390 VYSRKVEYLYTLVLHALEFLSQKRQQDQTEKTSGQSEGSGPKNVVDDDNEPFLGLDEVPV 569
           VYS+KVEYLY LVL  LEFLS++R Q+Q++ TS ++E S  + V +++N+ F  +D++PV
Sbjct: 73  VYSKKVEYLYNLVLRTLEFLSKQRDQEQSKGTSNENEASSSRQVDEEENDLFWNVDDIPV 132

Query: 570 ETKNSLDDGHSKDDTSNLFGKPPANLVVLEGDCFDSIGDVGELESYLLATHDLYRDFILL 749
           +TKN LD     D   + F KPPANLVVLEGDC D+ GD GELESYLLAT  LYRDFILL
Sbjct: 133 DTKNRLDSSVGGDTCPSQFVKPPANLVVLEGDCLDTSGDGGELESYLLATTHLYRDFILL 192

Query: 750 DPCDAGAVDKYLGEDKAFKGSNVASRGALSRSKTRKSSFQTPTRRSGGGLHKSSLGETLD 929
           DPCDA AV+++LG++   KG N A RG    S  RK SF +   RSGG   KSS+G+   
Sbjct: 193 DPCDAVAVNEFLGDNYGGKGRNSAHRG----SSVRK-SFHSSVGRSGGSARKSSVGKNQG 247

Query: 930 GNLTRTP 950
            N+  +P
Sbjct: 248 TNVHLSP 254