BLASTX nr result
ID: Coptis21_contig00023809
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023809 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra... 76 3e-12 emb|CBI16521.3| unnamed protein product [Vitis vinifera] 76 3e-12 ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus ... 68 7e-10 ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent tra... 67 2e-09 ref|XP_002283586.2| PREDICTED: LOW QUALITY PROTEIN: protochlorop... 65 6e-09 >ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Vitis vinifera] Length = 532 Score = 76.3 bits (186), Expect = 3e-12 Identities = 32/45 (71%), Positives = 43/45 (95%) Frame = +2 Query: 2 RQSVMSMAAKTSVVSFAVLCFAASRWLSQFIYKIFYFHDFNHAVK 136 +QS+MS+AA+T++VS AV+CFAASRWLS FIYKIF+FHD+NHA++ Sbjct: 488 KQSLMSVAARTALVSMAVICFAASRWLSHFIYKIFHFHDYNHALR 532 >emb|CBI16521.3| unnamed protein product [Vitis vinifera] Length = 401 Score = 76.3 bits (186), Expect = 3e-12 Identities = 32/45 (71%), Positives = 43/45 (95%) Frame = +2 Query: 2 RQSVMSMAAKTSVVSFAVLCFAASRWLSQFIYKIFYFHDFNHAVK 136 +QS+MS+AA+T++VS AV+CFAASRWLS FIYKIF+FHD+NHA++ Sbjct: 357 KQSLMSVAARTALVSMAVICFAASRWLSHFIYKIFHFHDYNHALR 401 >ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus communis] gi|223526766|gb|EEF28992.1| pheophorbide A oxygenase, putative [Ricinus communis] Length = 552 Score = 68.2 bits (165), Expect = 7e-10 Identities = 28/45 (62%), Positives = 40/45 (88%) Frame = +2 Query: 2 RQSVMSMAAKTSVVSFAVLCFAASRWLSQFIYKIFYFHDFNHAVK 136 +QSV+S AA+T++V+ AV CFAASRWL+ FIYK F++HD+NHA++ Sbjct: 508 KQSVLSAAARTTLVAVAVACFAASRWLAHFIYKSFHYHDYNHALR 552 >ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis sativus] Length = 538 Score = 66.6 bits (161), Expect = 2e-09 Identities = 27/45 (60%), Positives = 39/45 (86%) Frame = +2 Query: 2 RQSVMSMAAKTSVVSFAVLCFAASRWLSQFIYKIFYFHDFNHAVK 136 +QS++S AA+ +V+ A+LCFA+SRWLS FIYK F+FHD+NHA++ Sbjct: 494 KQSLVSGAARVLMVAMAILCFASSRWLSHFIYKSFHFHDYNHAIR 538 >ref|XP_002283586.2| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Vitis vinifera] Length = 473 Score = 65.1 bits (157), Expect = 6e-09 Identities = 28/40 (70%), Positives = 34/40 (85%) Frame = +2 Query: 11 VMSMAAKTSVVSFAVLCFAASRWLSQFIYKIFYFHDFNHA 130 VMS+AA+ + VS A+LCFAASRWLS FIYK F+FHD+ HA Sbjct: 432 VMSVAARITAVSMAILCFAASRWLSYFIYKTFHFHDYTHA 471