BLASTX nr result

ID: Coptis21_contig00023785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023785
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270096.1| PREDICTED: uncharacterized protein LOC100243...   188   3e-46
ref|XP_002524643.1| conserved hypothetical protein [Ricinus comm...   178   5e-43
gb|AFK35231.1| unknown [Medicago truncatula]                          177   8e-43
ref|XP_003555280.1| PREDICTED: uncharacterized protein LOC100809...   170   1e-40
ref|XP_002313152.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38

>ref|XP_002270096.1| PREDICTED: uncharacterized protein LOC100243866 [Vitis vinifera]
           gi|147781856|emb|CAN67723.1| hypothetical protein
           VITISV_006022 [Vitis vinifera]
          Length = 526

 Score =  188 bits (478), Expect = 3e-46
 Identities = 85/126 (67%), Positives = 107/126 (84%), Gaps = 4/126 (3%)
 Frame = +2

Query: 2   WEQDAEGNAVVFEAILHDDASGMEVATWKP----MDGGNPKSGLRKRYSGGSRVFNKSGG 169
           W+QDAEGNA +FEA+L ++ SGMEVAT KP     +G   ++GL KRYSG +R+F+KSGG
Sbjct: 401 WDQDAEGNAAIFEAVLCENNSGMEVATNKPPNTISEGDKWENGLGKRYSGANRMFSKSGG 460

Query: 170 LVLAGDEYGDWVSWRMSKEMEGSVLKWRLGGKVWLSYWPNDVKSNHFETRCVDWCDEVDL 349
           LV AGDEYG+ V WR+SKEMEGSVLKWR+GG++WLSYWPN++K+++FETRCV+WCDEVDL
Sbjct: 461 LVFAGDEYGEGVEWRLSKEMEGSVLKWRIGGQIWLSYWPNEIKTSYFETRCVEWCDEVDL 520

Query: 350 PLIQGK 367
           PLI  K
Sbjct: 521 PLIPCK 526


>ref|XP_002524643.1| conserved hypothetical protein [Ricinus communis]
           gi|223536004|gb|EEF37662.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 535

 Score =  178 bits (451), Expect = 5e-43
 Identities = 80/128 (62%), Positives = 102/128 (79%), Gaps = 6/128 (4%)
 Frame = +2

Query: 2   WEQDAEGNAVVFEAILHDDASGMEVATWKP-----MDGGNPKS-GLRKRYSGGSRVFNKS 163
           W+QDAEGN V+F+A+LH++ +G EVA W        DGG+ KS G   ++ G +R F K+
Sbjct: 408 WDQDAEGNTVIFDAVLHNNINGQEVAAWNSNIDNTSDGGDGKSSGNENKFKGPNRPFTKT 467

Query: 164 GGLVLAGDEYGDWVSWRMSKEMEGSVLKWRLGGKVWLSYWPNDVKSNHFETRCVDWCDEV 343
            GLV AGDEYG+ V WR+SKEMEGSVLKWR+GG+VW+SYWP++VKS++FETRCV+WCDEV
Sbjct: 468 RGLVFAGDEYGEGVEWRLSKEMEGSVLKWRIGGEVWVSYWPSEVKSSYFETRCVEWCDEV 527

Query: 344 DLPLIQGK 367
           DLPLI GK
Sbjct: 528 DLPLIPGK 535


>gb|AFK35231.1| unknown [Medicago truncatula]
          Length = 132

 Score =  177 bits (449), Expect = 8e-43
 Identities = 77/121 (63%), Positives = 98/121 (80%)
 Frame = +2

Query: 5   EQDAEGNAVVFEAILHDDASGMEVATWKPMDGGNPKSGLRKRYSGGSRVFNKSGGLVLAG 184
           +QDAEGNA +F+ +LHD+ +G EV +WKP  G +P  GLR RY G +R F+KSG +V+AG
Sbjct: 9   DQDAEGNAAIFDVVLHDNMTGQEVGSWKPT-GDDPIHGLRGRYVGANRPFSKSGSVVIAG 67

Query: 185 DEYGDWVSWRMSKEMEGSVLKWRLGGKVWLSYWPNDVKSNHFETRCVDWCDEVDLPLIQG 364
           DEYG+ V WR+SKEMEGSVLKWR+GG+ W+SY P+  K +HFETRC++WCDEVDLPLI G
Sbjct: 68  DEYGEEVGWRLSKEMEGSVLKWRIGGEFWVSYLPDQAKGSHFETRCIEWCDEVDLPLIHG 127

Query: 365 K 367
           K
Sbjct: 128 K 128


>ref|XP_003555280.1| PREDICTED: uncharacterized protein LOC100809854 [Glycine max]
          Length = 528

 Score =  170 bits (431), Expect = 1e-40
 Identities = 73/123 (59%), Positives = 97/123 (78%), Gaps = 2/123 (1%)
 Frame = +2

Query: 5   EQDAEGNAVVFEAILHDDASGMEVATWKPMD--GGNPKSGLRKRYSGGSRVFNKSGGLVL 178
           +QDAEGNA +F+ +LHD+ +G E+ +W+P+   GG+P  GLR RY+  +R FNKSG +V+
Sbjct: 404 DQDAEGNAAIFDVVLHDNTTGQEMGSWRPISETGGDPGHGLRGRYARANRAFNKSGSVVI 463

Query: 179 AGDEYGDWVSWRMSKEMEGSVLKWRLGGKVWLSYWPNDVKSNHFETRCVDWCDEVDLPLI 358
           AGDEYG+ V WR+ KEMEGSV+KWR+GG+ W+SY PN  K + FETR ++WCDEVDLPLI
Sbjct: 464 AGDEYGEEVGWRLCKEMEGSVMKWRIGGEFWVSYLPNQAKGSSFETRYMEWCDEVDLPLI 523

Query: 359 QGK 367
            GK
Sbjct: 524 HGK 526


>ref|XP_002313152.1| predicted protein [Populus trichocarpa] gi|222849560|gb|EEE87107.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/128 (59%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
 Frame = +2

Query: 5   EQDAEGNAVVFEAILHDDASGMEVATWKPMDGGNPKS-------GLRKRYSGGSRVFNKS 163
           +QD EGNAVVF+A+L+D+ +G EVAT KP+  GN              R +G +R F K+
Sbjct: 403 DQDVEGNAVVFDAVLYDNMTGQEVATRKPIGDGNSVGVGGRNGKSFGTRCNGPNRPFTKT 462

Query: 164 GGLVLAGDEYGDWVSWRMSKEMEGSVLKWRLGGKVWLSYWPNDVKSNHFETRCVDWCDEV 343
           GG+V AGDEYG+ V WR+SKE EGSVLKWRLGG+VW+SY P++VKS+HFETR V+WCDEV
Sbjct: 463 GGVVFAGDEYGEGVEWRLSKETEGSVLKWRLGGQVWVSYCPSEVKSSHFETRSVEWCDEV 522

Query: 344 DLPLIQGK 367
           DLP+I  K
Sbjct: 523 DLPIIPAK 530


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