BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023783
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
ref|XP_003617758.1| Pentatricopeptide repeat-containing protein ...   150   1e-34
ref|XP_002314384.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33
ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
emb|CBI26055.3| unnamed protein product [Vitis vinifera]              144   1e-32

>ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like
            [Glycine max]
          Length = 905

 Score =  153 bits (386), Expect = 3e-35
 Identities = 72/94 (76%), Positives = 83/94 (88%)
 Frame = +2

Query: 2    NIAVANELFERFRAGGNIPDSACYNALIEGLSNCNKAMDAFTLFEETRFRGCRINTKTCI 181
            N+  A +LFERF++ G IPDSACYNA+IEGLSN NKAMDA+ LFEETR +GCRI +KTC+
Sbjct: 811  NVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCV 870

Query: 182  TLLDALHKAECLEQAAIVGAVLREMANSQHASRL 283
             LLDALHKA+CLEQAAIVGAVLREMA SQHA+RL
Sbjct: 871  VLLDALHKADCLEQAAIVGAVLREMAKSQHATRL 904


>ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355519093|gb|AET00717.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  150 bits (380), Expect = 1e-34
 Identities = 69/94 (73%), Positives = 83/94 (88%)
 Frame = +2

Query: 2    NIAVANELFERFRAGGNIPDSACYNALIEGLSNCNKAMDAFTLFEETRFRGCRINTKTCI 181
            N+  A  LF+RF+A G +PDSACYNA+IEGLS+ NKAMDA+ +FEETR +GCR+N+KTC+
Sbjct: 812  NVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCV 871

Query: 182  TLLDALHKAECLEQAAIVGAVLREMANSQHASRL 283
             LLDALHKA+CLEQAAIVGAVLREMA SQHA+RL
Sbjct: 872  VLLDALHKADCLEQAAIVGAVLREMAKSQHATRL 905


>ref|XP_002314384.1| predicted protein [Populus trichocarpa] gi|222863424|gb|EEF00555.1|
           predicted protein [Populus trichocarpa]
          Length = 764

 Score =  145 bits (365), Expect = 8e-33
 Identities = 70/93 (75%), Positives = 80/93 (86%)
 Frame = +2

Query: 2   NIAVANELFERFRAGGNIPDSACYNALIEGLSNCNKAMDAFTLFEETRFRGCRINTKTCI 181
           N+A A+ LFERFRA G IPDSA YNA+IEGLS  N+A+DA+ LFEETR +GC I+TKTC+
Sbjct: 670 NVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCV 729

Query: 182 TLLDALHKAECLEQAAIVGAVLREMANSQHASR 280
            LLDALHKAECLEQAAIVGAVLRE A SQHA+R
Sbjct: 730 ALLDALHKAECLEQAAIVGAVLRETAKSQHAAR 762


>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like
            [Vitis vinifera]
          Length = 898

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/93 (75%), Positives = 79/93 (84%)
 Frame = +2

Query: 2    NIAVANELFERFRAGGNIPDSACYNALIEGLSNCNKAMDAFTLFEETRFRGCRINTKTCI 181
            NI  A+ LF RF+A G IPDSA YNA+IEGLS+ NKAMDA+ LFEETR +GC I+TKTC+
Sbjct: 804  NILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCV 863

Query: 182  TLLDALHKAECLEQAAIVGAVLREMANSQHASR 280
             LLDALHKAECLEQAAIVGAVL+E A SQHASR
Sbjct: 864  VLLDALHKAECLEQAAIVGAVLKETAKSQHASR 896


>emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/93 (75%), Positives = 79/93 (84%)
 Frame = +2

Query: 2   NIAVANELFERFRAGGNIPDSACYNALIEGLSNCNKAMDAFTLFEETRFRGCRINTKTCI 181
           NI  A+ LF RF+A G IPDSA YNA+IEGLS+ NKAMDA+ LFEETR +GC I+TKTC+
Sbjct: 559 NILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCV 618

Query: 182 TLLDALHKAECLEQAAIVGAVLREMANSQHASR 280
            LLDALHKAECLEQAAIVGAVL+E A SQHASR
Sbjct: 619 VLLDALHKAECLEQAAIVGAVLKETAKSQHASR 651