BLASTX nr result

ID: Coptis21_contig00023781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023781
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis...   426   e-117
gb|ACF35653.1| ATP synthase beta subunit [Floydia praealta]           425   e-117
gb|AAX73333.1| ATP synthase beta subunit [Banksia ericifolia] gi...   424   e-116
gb|AAX73349.1| ATP synthase beta subunit [Austromuellera trinervia]   424   e-116
gb|AAX73332.1| ATP synthase beta subunit [Banksia oblongifolia]       424   e-116

>ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis saniculifolia]
           gi|226933889|gb|ACO92022.1| ATP synthase CF1 beta
           subunit [Megaleranthis saniculifolia]
          Length = 498

 Score =  426 bits (1095), Expect = e-117
 Identities = 215/218 (98%), Positives = 217/218 (99%)
 Frame = -2

Query: 659 MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 480
           M+INPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFP GKMPNIYNALVVKGQDTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPLGKMPNIYNALVVKGQDTVGQQIN 60

Query: 479 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 300
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEV+DTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 299 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 120
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 180

Query: 119 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 6
           LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE
Sbjct: 181 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 218


>gb|ACF35653.1| ATP synthase beta subunit [Floydia praealta]
          Length = 487

 Score =  425 bits (1093), Expect = e-117
 Identities = 215/218 (98%), Positives = 217/218 (99%)
 Frame = -2

Query: 659 MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 480
           MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 479 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 300
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 299 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 120
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 180

Query: 119 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 6
           LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE
Sbjct: 181 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 218


>gb|AAX73333.1| ATP synthase beta subunit [Banksia ericifolia]
           gi|62184046|gb|AAX73334.1| ATP synthase beta subunit
           [Banksia brownii] gi|62184052|gb|AAX73337.1| ATP
           synthase beta subunit [Banksia nutans]
           gi|62184056|gb|AAX73339.1| ATP synthase beta subunit
           [Banksia pulchella] gi|62184074|gb|AAX73348.1| ATP
           synthase beta subunit [Musgravea heterophylla]
          Length = 497

 Score =  424 bits (1090), Expect = e-116
 Identities = 214/218 (98%), Positives = 217/218 (99%)
 Frame = -2

Query: 659 MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 480
           M+INPTTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 479 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 300
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 299 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 120
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 180

Query: 119 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 6
           LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE
Sbjct: 181 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 218


>gb|AAX73349.1| ATP synthase beta subunit [Austromuellera trinervia]
          Length = 496

 Score =  424 bits (1090), Expect = e-116
 Identities = 214/218 (98%), Positives = 217/218 (99%)
 Frame = -2

Query: 659 MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 480
           M+INPTTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 479 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 300
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 299 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 120
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 180

Query: 119 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 6
           LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE
Sbjct: 181 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 218


>gb|AAX73332.1| ATP synthase beta subunit [Banksia oblongifolia]
          Length = 494

 Score =  424 bits (1090), Expect = e-116
 Identities = 214/218 (98%), Positives = 217/218 (99%)
 Frame = -2

Query: 659 MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 480
           M+INPTTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 479 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 300
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 299 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 120
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTV 180

Query: 119 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 6
           LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE
Sbjct: 181 LIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 218


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