BLASTX nr result

ID: Coptis21_contig00023775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023775
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-64
ref|XP_003528738.1| PREDICTED: pectinesterase 3-like [Glycine max]    249   2e-64
sp|Q43111.1|PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE ...   248   5e-64
emb|CBI35795.3| unnamed protein product [Vitis vinifera]              246   2e-63
ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]      246   2e-63

>ref|XP_002304256.1| predicted protein [Populus trichocarpa] gi|222841688|gb|EEE79235.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  249 bits (637), Expect = 1e-64
 Identities = 117/170 (68%), Positives = 135/170 (79%), Gaps = 2/170 (1%)
 Frame = -1

Query: 527 FYRECDITGTIDFIFGNAAVIFQNCTIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCT 348
           FYR+CDITGTIDFIFGNAAV+FQNC IQPRQPL NQFNT+TAQGK DPNQNTGISIQ C 
Sbjct: 419 FYRDCDITGTIDFIFGNAAVVFQNCNIQPRQPLANQFNTITAQGKKDPNQNTGISIQKCK 478

Query: 347 IAALGNVTVNTYLGRPWKNFSTTIVMKSVIGSVVSPPGWIPWVTNVKPASTIFYAEYQNT 168
            +A  NVT  TYLGRPWK++STT++M+S IGS + P GWI WV+ V P +TIFYAEYQNT
Sbjct: 479 FSAFDNVTAPTYLGRPWKDYSTTVIMQSDIGSFLRPLGWISWVSGVDPPATIFYAEYQNT 538

Query: 167 GPGSKVAQRVTWA--KPTVTADEAAEFTVEPFIQGSQWLPQAGVTFTSAL 24
           G G+ V  RV W   KP +T DEA +F V+ FIQGS+WLP+  VTF S L
Sbjct: 539 GSGANVDGRVKWTGYKPALTVDEAGKFAVDSFIQGSEWLPKTSVTFQSML 588


>ref|XP_003528738.1| PREDICTED: pectinesterase 3-like [Glycine max]
          Length = 587

 Score =  249 bits (636), Expect = 2e-64
 Identities = 120/171 (70%), Positives = 137/171 (80%), Gaps = 3/171 (1%)
 Frame = -1

Query: 527 FYRECDITGTIDFIFGNAAVIFQNCTIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCT 348
           FYR+CDITGTIDFIFGNAA +FQNC I PRQPLPNQFNT+TAQGK DPNQNTGI IQ   
Sbjct: 417 FYRDCDITGTIDFIFGNAAAVFQNCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSK 476

Query: 347 IAALG-NVTVNTYLGRPWKNFSTTIVMKSVIGSVVSPPGWIPWVTNVKPASTIFYAEYQN 171
              LG N+T  TYLGRPWK+FSTT++M+S IGS + P GWI WV+NV+P STIFYAEYQN
Sbjct: 477 FIPLGNNLTAPTYLGRPWKDFSTTVIMQSDIGSFLKPVGWISWVSNVEPVSTIFYAEYQN 536

Query: 170 TGPGSKVAQRVTWA--KPTVTADEAAEFTVEPFIQGSQWLPQAGVTFTSAL 24
           TGPG+ V+QRV WA  KPT+T  EA +FTV+ FIQG +WLP A V F S L
Sbjct: 537 TGPGADVSQRVKWAGYKPTLTDVEADKFTVQSFIQGPEWLPNAAVEFDSTL 587


>sp|Q43111.1|PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin
           methylesterase 3; Flags: Precursor
           gi|732913|emb|CAA59482.1| pectinesterase [Phaseolus
           vulgaris]
          Length = 581

 Score =  248 bits (632), Expect = 5e-64
 Identities = 117/171 (68%), Positives = 139/171 (81%), Gaps = 3/171 (1%)
 Frame = -1

Query: 527 FYRECDITGTIDFIFGNAAVIFQNCTIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCT 348
           FYR+CDITGTIDFIFGNAAV+FQ+C I PRQPLPNQFNT+TAQGK DPNQNTGI IQ  T
Sbjct: 411 FYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKST 470

Query: 347 IAALG-NVTVNTYLGRPWKNFSTTIVMKSVIGSVVSPPGWIPWVTNVKPASTIFYAEYQN 171
           I   G N+T  TYLGRPWK+FSTT++M+S IG++++P GW+ WV NV+P +TIFYAEYQN
Sbjct: 471 ITPFGNNLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQN 530

Query: 170 TGPGSKVAQRVTWA--KPTVTADEAAEFTVEPFIQGSQWLPQAGVTFTSAL 24
           +GPG+ V+QRV WA  KPT+T   A EFTV+ FIQG +WLP A V F S L
Sbjct: 531 SGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581


>emb|CBI35795.3| unnamed protein product [Vitis vinifera]
          Length = 670

 Score =  246 bits (627), Expect = 2e-63
 Identities = 117/170 (68%), Positives = 137/170 (80%), Gaps = 2/170 (1%)
 Frame = -1

Query: 527  FYRECDITGTIDFIFGNAAVIFQNCTIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCT 348
            FYRECDITGTIDFIFGNAAV+FQ C IQPRQP+ NQFNT+TAQGK DPNQNTGISIQ C+
Sbjct: 501  FYRECDITGTIDFIFGNAAVVFQACKIQPRQPMSNQFNTITAQGKKDPNQNTGISIQKCS 560

Query: 347  IAALGNVTVNTYLGRPWKNFSTTIVMKSVIGSVVSPPGWIPWVTNVKPASTIFYAEYQNT 168
            I+AL  +T  TYLGRPWK +STTIVM+S IGS ++P GW  WVT V P STIFYAE+QNT
Sbjct: 561  ISALNTLTAPTYLGRPWKAYSTTIVMQSNIGSFLNPKGWTEWVTGVDPPSTIFYAEFQNT 620

Query: 167  GPGSKVAQRVTWA--KPTVTADEAAEFTVEPFIQGSQWLPQAGVTFTSAL 24
            GPG+ + QRV WA     +T DEAA+FTV  FIQG+ WL ++ VTF ++L
Sbjct: 621  GPGATLDQRVKWAGFMTNITEDEAAKFTVGTFIQGASWLSESSVTFDASL 670



 Score =  168 bits (426), Expect = 4e-40
 Identities = 86/175 (49%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
 Frame = -1

Query: 527 FYRECDITGTIDFIFGNAAVIFQNCTIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCT 348
           FY  C + GT+DFIFGNAA +FQ+C I  R+P   Q N LTAQG+TDPNQNTGI IQ C 
Sbjct: 87  FYINCLVAGTVDFIFGNAAAVFQDCDIHARRPNSGQKNMLTAQGRTDPNQNTGIVIQKCR 146

Query: 347 IAALGNV-----TVNTYLGRPWKNFSTTIVMKSVIGSVVSPPGWIPWVTNVKPASTIFYA 183
           I A  ++     +  TYLGRPWK +S T+VM++ I +V+ P GW  W +     ST++Y 
Sbjct: 147 IGATSDLQAVISSFKTYLGRPWKEYSRTVVMQTSITNVIDPAGWHEW-SGSFALSTLYYG 205

Query: 182 EYQNTGPGSKVAQRVTWA--KPTVTADEAAEFTVEPFIQGSQWLPQAGVTFTSAL 24
           EYQNTG G+  ++RVTW   K   +A EA  FT   FI GS WL   G  ++  L
Sbjct: 206 EYQNTGAGAGTSKRVTWKGFKVITSASEAQGFTPGTFIAGSSWLGSTGFPYSLGL 260


>ref|XP_002265217.1| PREDICTED: pectinesterase 3 [Vitis vinifera]
          Length = 578

 Score =  246 bits (627), Expect = 2e-63
 Identities = 117/170 (68%), Positives = 137/170 (80%), Gaps = 2/170 (1%)
 Frame = -1

Query: 527 FYRECDITGTIDFIFGNAAVIFQNCTIQPRQPLPNQFNTLTAQGKTDPNQNTGISIQGCT 348
           FYRECDITGTIDFIFGNAAV+FQ C IQPRQP+ NQFNT+TAQGK DPNQNTGISIQ C+
Sbjct: 409 FYRECDITGTIDFIFGNAAVVFQACKIQPRQPMSNQFNTITAQGKKDPNQNTGISIQKCS 468

Query: 347 IAALGNVTVNTYLGRPWKNFSTTIVMKSVIGSVVSPPGWIPWVTNVKPASTIFYAEYQNT 168
           I+AL  +T  TYLGRPWK +STTIVM+S IGS ++P GW  WVT V P STIFYAE+QNT
Sbjct: 469 ISALNTLTAPTYLGRPWKAYSTTIVMQSNIGSFLNPKGWTEWVTGVDPPSTIFYAEFQNT 528

Query: 167 GPGSKVAQRVTWA--KPTVTADEAAEFTVEPFIQGSQWLPQAGVTFTSAL 24
           GPG+ + QRV WA     +T DEAA+FTV  FIQG+ WL ++ VTF ++L
Sbjct: 529 GPGATLDQRVKWAGFMTNITEDEAAKFTVGTFIQGASWLSESSVTFDASL 578


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