BLASTX nr result

ID: Coptis21_contig00023764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023764
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328737.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    77   1e-12
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               77   1e-12
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    77   1e-12
ref|XP_003622666.1| B3 domain-containing protein [Medicago trunc...    74   1e-11

>ref|XP_002328737.1| predicted protein [Populus trichocarpa] gi|222839035|gb|EEE77386.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/111 (40%), Positives = 62/111 (55%)
 Frame = -1

Query: 415 TTAFTSEHPFCKINMCCSFVSRNFTLNIPTSFARKYLKDAPEDRDATLRTSHGGPWHARY 236
           T+AF SE+PF K+ M  S+V   + L++P+SFARKY        + TL  + G  W  +Y
Sbjct: 263 TSAFKSENPFFKVAMSPSYVHTGYKLSVPSSFARKYF--TKNKGNVTLCVTDGRTWPVKY 320

Query: 235 AVRTFQKGVHHYRLIMGWKAFVLDNHLKTGDDCIFELVDRNQIEFKVSIVR 83
             RT + GV       GWKAF  DN L  GD C+FEL++  ++  KV   R
Sbjct: 321 CNRT-KSGV---IFCHGWKAFAKDNKLAVGDFCVFELINVTEMSLKVVFFR 367


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/108 (37%), Positives = 58/108 (53%)
 Frame = -1

Query: 406 FTSEHPFCKINMCCSFVSRNFTLNIPTSFARKYLKDAPEDRDATLRTSHGGPWHARYAVR 227
           F   +PFC++ +  S+V   F L++P+ FA KYL      +   L+TS G  WH R    
Sbjct: 294 FQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGV--SKFIKLQTSDGKQWHVRCL-- 349

Query: 226 TFQKGVHHYRLIMGWKAFVLDNHLKTGDDCIFELVDRNQIEFKVSIVR 83
               G    +L  GW  FV DN+L+ GD C+FEL++   +  KVSI R
Sbjct: 350 ---SGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFR 394


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/108 (37%), Positives = 58/108 (53%)
 Frame = -1

Query: 406 FTSEHPFCKINMCCSFVSRNFTLNIPTSFARKYLKDAPEDRDATLRTSHGGPWHARYAVR 227
           F   +PFC++ +  S+V   F L++P+ FA KYL      +   L+TS G  WH R    
Sbjct: 242 FQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGV--SKFIKLQTSDGKQWHVRCL-- 297

Query: 226 TFQKGVHHYRLIMGWKAFVLDNHLKTGDDCIFELVDRNQIEFKVSIVR 83
               G    +L  GW  FV DN+L+ GD C+FEL++   +  KVSI R
Sbjct: 298 ---SGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFR 342


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/108 (37%), Positives = 58/108 (53%)
 Frame = -1

Query: 406 FTSEHPFCKINMCCSFVSRNFTLNIPTSFARKYLKDAPEDRDATLRTSHGGPWHARYAVR 227
           F   +PFC++ +  S+V   F L++P+ FA KYL      +   L+TS G  WH R    
Sbjct: 450 FQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGV--SKFIKLQTSDGKQWHVRCL-- 505

Query: 226 TFQKGVHHYRLIMGWKAFVLDNHLKTGDDCIFELVDRNQIEFKVSIVR 83
               G    +L  GW  FV DN+L+ GD C+FEL++   +  KVSI R
Sbjct: 506 ---SGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFR 550


>ref|XP_003622666.1| B3 domain-containing protein [Medicago truncatula]
           gi|355497681|gb|AES78884.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 330

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/113 (33%), Positives = 58/113 (51%)
 Frame = -1

Query: 421 ESTTAFTSEHPFCKINMCCSFVSRNFTLNIPTSFARKYLKDAPEDRDATLRTSHGGPWHA 242
           E   +F + +P   + M  S+V  +F LNIP SF  ++     +  D   +  + G W A
Sbjct: 195 ERAQSFKTSNPSFVVVMRASYVKHHFLLNIPRSFGNRHFDLDKKRGDIYFQVLNKGVWPA 254

Query: 241 RYAVRTFQKGVHHYRLIMGWKAFVLDNHLKTGDDCIFELVDRNQIEFKVSIVR 83
           +Y+++  + G+H   +  GWKAF  DN LK  D C FEL+    + F V I R
Sbjct: 255 KYSIKKTRNGLHFELMTTGWKAFAKDNKLKVDDVCKFELISCTILTFIVHIFR 307


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