BLASTX nr result

ID: Coptis21_contig00023761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023761
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267096.1| PREDICTED: uncharacterized protein LOC100257...   162   3e-38
ref|XP_002306699.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002302176.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_004170252.1| PREDICTED: UPF0496 protein 4-like isoform 1 ...   151   6e-35
ref|XP_004139685.1| PREDICTED: UPF0496 protein 4-like [Cucumis s...   151   6e-35

>ref|XP_002267096.1| PREDICTED: uncharacterized protein LOC100257198 isoform 1 [Vitis
           vinifera] gi|359493118|ref|XP_003634513.1| PREDICTED:
           uncharacterized protein LOC100257198 isoform 2 [Vitis
           vinifera]
          Length = 387

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/122 (67%), Positives = 100/122 (81%), Gaps = 3/122 (2%)
 Frame = +2

Query: 95  MPATEYQGS---IASLGRSILSIRRDQVHNMDGNNEASAQEAELESFQKQVADRFNDLSA 265
           MPAT++QGS    +++GRSILSIRRDQVH+M+G +E +  E ELE+FQ+QVADRF  +S+
Sbjct: 1   MPATDFQGSSSPFSNIGRSILSIRRDQVHSMEGTHEVTGLEVELEAFQRQVADRFLQVSS 60

Query: 266 VSNEDLLSLGWIRRLLDEFICCQEEFRGILFNNKGHLCRQPMDRFIAEYFERSVKALDVC 445
            S+E LLSL W+R+LLD F+CCQEEFR ILFNNK  L R PMDR I E+FERSVKALDVC
Sbjct: 61  GSSE-LLSLSWVRKLLDVFLCCQEEFRVILFNNKASLGRAPMDRLIGEFFERSVKALDVC 119

Query: 446 NA 451
           NA
Sbjct: 120 NA 121


>ref|XP_002306699.1| predicted protein [Populus trichocarpa] gi|222856148|gb|EEE93695.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  160 bits (404), Expect = 1e-37
 Identities = 79/119 (66%), Positives = 92/119 (77%)
 Frame = +2

Query: 95  MPATEYQGSIASLGRSILSIRRDQVHNMDGNNEASAQEAELESFQKQVADRFNDLSAVSN 274
           MPAT+YQ S ASL  SIL +RRDQVH+MD     S  E EL++FQKQV DRF DLSAV  
Sbjct: 1   MPATDYQSSSASLRHSILGLRRDQVHSMDSPQTTSTLELELDAFQKQVTDRFLDLSAVGP 60

Query: 275 EDLLSLGWIRRLLDEFICCQEEFRGILFNNKGHLCRQPMDRFIAEYFERSVKALDVCNA 451
           + LLSL WIR+LLD F+CCQEEFR ILFNNK  + R P+DR + E+FER+VKALDVCNA
Sbjct: 61  DRLLSLAWIRKLLDSFLCCQEEFRVILFNNKSLVHRPPLDRLVQEFFERTVKALDVCNA 119


>ref|XP_002302176.1| predicted protein [Populus trichocarpa] gi|222843902|gb|EEE81449.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/119 (63%), Positives = 93/119 (78%)
 Frame = +2

Query: 95  MPATEYQGSIASLGRSILSIRRDQVHNMDGNNEASAQEAELESFQKQVADRFNDLSAVSN 274
           MPAT+YQGS ASL  SILS+RRD VH+MD     SA E ELE+FQ+QV +RF +LS+   
Sbjct: 1   MPATDYQGSSASLRHSILSLRRDPVHSMDSQQSTSALELELEAFQRQVTERFLELSSAGP 60

Query: 275 EDLLSLGWIRRLLDEFICCQEEFRGILFNNKGHLCRQPMDRFIAEYFERSVKALDVCNA 451
           + LLSL WI++LLD F+CCQEEFR ILFN+K  + R P+DRF+ +YFER+VK LDVCNA
Sbjct: 61  DRLLSLAWIQKLLDSFLCCQEEFRVILFNHKSLVHRPPLDRFVQDYFERTVKGLDVCNA 119


>ref|XP_004170252.1| PREDICTED: UPF0496 protein 4-like isoform 1 [Cucumis sativus]
           gi|449526503|ref|XP_004170253.1| PREDICTED: UPF0496
           protein 4-like isoform 2 [Cucumis sativus]
          Length = 394

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/122 (58%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
 Frame = +2

Query: 95  MPATEYQGS---IASLGRSILSIRRDQVHNMDGNN-EASAQEAELESFQKQVADRFNDLS 262
           MPAT++QGS   + ++GRSI S+RRDQVH+M+G++ +    +++L+SFQKQV  RF DLS
Sbjct: 1   MPATDFQGSSSPLTNIGRSIFSLRRDQVHSMEGSSHDGIVLDSDLDSFQKQVTQRFQDLS 60

Query: 263 AVSNEDLLSLGWIRRLLDEFICCQEEFRGILFNNKGHLCRQPMDRFIAEYFERSVKALDV 442
           + S++D+LSL WIR+LLD FICCQEEF+ IL  +K  +CR P+DR +++Y ERSVKALDV
Sbjct: 61  SASSDDILSLSWIRKLLDAFICCQEEFKIILNGHKAEICRPPIDRMVSDYLERSVKALDV 120

Query: 443 CN 448
           CN
Sbjct: 121 CN 122


>ref|XP_004139685.1| PREDICTED: UPF0496 protein 4-like [Cucumis sativus]
          Length = 394

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/122 (58%), Positives = 98/122 (80%), Gaps = 4/122 (3%)
 Frame = +2

Query: 95  MPATEYQGS---IASLGRSILSIRRDQVHNMDGNN-EASAQEAELESFQKQVADRFNDLS 262
           MPAT++QGS   + ++GRSI S+RRDQVH+M+G++ +    +++L+SFQKQV  RF DLS
Sbjct: 1   MPATDFQGSSSPLTNIGRSIFSLRRDQVHSMEGSSHDGIVLDSDLDSFQKQVTQRFQDLS 60

Query: 263 AVSNEDLLSLGWIRRLLDEFICCQEEFRGILFNNKGHLCRQPMDRFIAEYFERSVKALDV 442
           + S++D+LSL WIR+LLD FICCQEEF+ IL  +K  +CR P+DR +++Y ERSVKALDV
Sbjct: 61  SASSDDILSLSWIRKLLDAFICCQEEFKIILNGHKAEICRPPIDRMVSDYLERSVKALDV 120

Query: 443 CN 448
           CN
Sbjct: 121 CN 122


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