BLASTX nr result

ID: Coptis21_contig00023758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023758
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27138.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   124   6e-27
ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212...   124   6e-27
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...   124   8e-27
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei...   124   8e-27

>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = +3

Query: 45  AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSL 224
           +ILLEDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGATKVCLCLDRRVHG +SL
Sbjct: 14  SILLEDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGSESL 73

Query: 225 LSHKLSEWQGP 257
           LS KL++WQGP
Sbjct: 74  LSEKLAQWQGP 84


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/71 (84%), Positives = 67/71 (94%)
 Frame = +3

Query: 45  AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSL 224
           +ILLEDFGQ+VDLTRRIREVL+NYPEGTTVLKEL+QNADDAGATKVCLCLDRRVHG +SL
Sbjct: 10  SILLEDFGQKVDLTRRIREVLLNYPEGTTVLKELVQNADDAGATKVCLCLDRRVHGRESL 69

Query: 225 LSHKLSEWQGP 257
           LS  L+ +QGP
Sbjct: 70  LSASLAPFQGP 80



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = +3

Query: 57   EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSHK 236
            E FGQ   LT R+R +L  Y +G  +L ELIQNA+DAG+++V   LD+  +G  S+LS +
Sbjct: 1386 EAFGQHEALTNRLRHILDMYADGPGILFELIQNAEDAGSSEVIFLLDKTHYGTSSVLSPE 1445

Query: 237  LSEWQGP 257
            +++WQGP
Sbjct: 1446 MADWQGP 1452


>ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212447 [Cucumis sativus]
          Length = 4709

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/71 (84%), Positives = 67/71 (94%)
 Frame = +3

Query: 45  AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSL 224
           +ILLEDFGQ+VDLTRRIREVL+NYPEGTTVLKEL+QNADDAGATKVCLCLDRRVHG +SL
Sbjct: 10  SILLEDFGQKVDLTRRIREVLLNYPEGTTVLKELVQNADDAGATKVCLCLDRRVHGRESL 69

Query: 225 LSHKLSEWQGP 257
           LS  L+ +QGP
Sbjct: 70  LSASLAPFQGP 80



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = +3

Query: 57   EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSHK 236
            E FGQ   LT R+R +L  Y +G  +L ELIQNA+DAG+++V   LD+  +G  S+LS +
Sbjct: 1386 EAFGQHEALTNRLRHILDMYADGPGILFELIQNAEDAGSSEVIFLLDKTHYGTSSVLSPE 1445

Query: 237  LSEWQGP 257
            +++WQGP
Sbjct: 1446 MADWQGP 1452


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317873|gb|EFH48295.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/71 (84%), Positives = 66/71 (92%)
 Frame = +3

Query: 45  AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSL 224
           ++LLEDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGATKV LCLDRRVHG  SL
Sbjct: 3   SLLLEDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSL 62

Query: 225 LSHKLSEWQGP 257
           LS  L++WQGP
Sbjct: 63  LSDSLAQWQGP 73



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = +3

Query: 57   EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSHK 236
            E FGQ   LT R++ +L  Y +G  +L EL+QNA+DAGA++V   LD+  +G  SLLS +
Sbjct: 1379 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPE 1438

Query: 237  LSEWQGP 257
            +++WQGP
Sbjct: 1439 MADWQGP 1445


>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
           thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332005740|gb|AED93123.1| C3HC4-type RING finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 4706

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/71 (84%), Positives = 66/71 (92%)
 Frame = +3

Query: 45  AILLEDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSL 224
           ++LLEDFGQ+VDLTRRIREVL+NYPEGTTVLKELIQNADDAGATKV LCLDRRVHG  SL
Sbjct: 3   SLLLEDFGQKVDLTRRIREVLLNYPEGTTVLKELIQNADDAGATKVRLCLDRRVHGSGSL 62

Query: 225 LSHKLSEWQGP 257
           LS  L++WQGP
Sbjct: 63  LSDSLAQWQGP 73



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = +3

Query: 57   EDFGQRVDLTRRIREVLVNYPEGTTVLKELIQNADDAGATKVCLCLDRRVHGVDSLLSHK 236
            E FGQ   LT R++ +L  Y +G  +L EL+QNA+DAGA++V   LD+  +G  SLLS +
Sbjct: 1379 EAFGQHEALTTRLKHILEMYADGPGILFELVQNAEDAGASEVTFLLDKTHYGTSSLLSPE 1438

Query: 237  LSEWQGP 257
            +++WQGP
Sbjct: 1439 MADWQGP 1445


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