BLASTX nr result

ID: Coptis21_contig00023754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023754
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326770.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    75   2e-11
ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    74   3e-11
ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    74   4e-11

>ref|XP_002326770.1| predicted protein [Populus trichocarpa] gi|222834092|gb|EEE72569.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
 Frame = +2

Query: 209 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLAYPKGMGIFKNKSLCLAMGAL 388
           +++P   + TW I  +S ++          TG +KW LL YPKG   FK KSL + +   
Sbjct: 172 MKQPSHSSFTWSIQKFSALDQESCKSQVFATGGHKWTLLVYPKGNSTFKGKSLSIFLTLE 231

Query: 389 KSE-LPLDKEVYAQWTTTIRDQVHGNHKSLIICTGRFGLNTSRLTANDVLPIGELNDQSR 565
            SE LP  + +YA++T  +RDQ+ G H         F  + +     + + + ELN  ++
Sbjct: 232 DSETLPSGRTMYAEFTLRVRDQLFGKHVEK-TANCHFSNSINDWGHFNFMSLDELNTLAK 290

Query: 566 GFLVNDTCIFEISVTFL 616
           GFLVN+T + E  +  L
Sbjct: 291 GFLVNNTLVVEAQIHVL 307


>ref|XP_003521551.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
           max]
          Length = 233

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 41/137 (29%), Positives = 66/137 (48%)
 Frame = +2

Query: 209 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLAYPKGMGIFKNKSLCLAMGAL 388
           I  PI ++ +W+   +S   +          GNY+W L+ YP G+   K  S+ L +   
Sbjct: 91  IHGPIPLSHSWKFDNFSLAKLDKYESESFVGGNYRWKLILYPNGIVEGKGNSISLFLTLE 150

Query: 389 KSELPLDKEVYAQWTTTIRDQVHGNHKSLIICTGRFGLNTSRLTANDVLPIGELNDQSRG 568
            S LP + ++  + T   + Q+ G+H     C  +F  + S      ++ + +L D + G
Sbjct: 151 VSTLPPNTKLVVECTLRAKKQISGHHAQTGFCR-KFSSSNSTWGTRQLVALAKLTDPNSG 209

Query: 569 FLVNDTCIFEISVTFLG 619
           FLVNDTCI E   T LG
Sbjct: 210 FLVNDTCILEAEFTILG 226


>ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|222850785|gb|EEE88332.1|
           predicted protein [Populus trichocarpa]
          Length = 1131

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 43/133 (32%), Positives = 68/133 (51%)
 Frame = +2

Query: 209 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLAYPKGMGIFKNKSLCLAMGAL 388
           + +P S   TW I  +S++N   +  +    G YKW +L +PKG  +  + S+ L + A 
Sbjct: 47  VDDPPSARFTWTIDNFSRLNAKKLYSDVFVVGGYKWRILIFPKGNNV-DHLSMYLDV-AD 104

Query: 389 KSELPLDKEVYAQWTTTIRDQVHGNHKSLIICTGRFGLNTSRLTANDVLPIGELNDQSRG 568
            + LP     YAQ++ T+ +Q+H  +        +F    S       +P+GEL D  RG
Sbjct: 105 SATLPYGWSRYAQFSLTVINQLHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGRG 164

Query: 569 FLVNDTCIFEISV 607
           +LVNDTC+ E  V
Sbjct: 165 YLVNDTCVVEADV 177


>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
           vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
           product [Vitis vinifera]
          Length = 1115

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 43/133 (32%), Positives = 68/133 (51%)
 Frame = +2

Query: 209 IQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLAYPKGMGIFKNKSLCLAMGAL 388
           +++P S   TW I  +S++N   +  +    G YKW +L +PKG  +  + S+ L + A 
Sbjct: 46  VEDPPSARFTWTIENFSRLNTKKLYSDVFYVGGYKWRVLIFPKGNNV-DHLSMYLDV-AD 103

Query: 389 KSELPLDKEVYAQWTTTIRDQVHGNHKSLIICTGRFGLNTSRLTANDVLPIGELNDQSRG 568
            + LP     YAQ++  + +Q+H           +F    S       +P+GEL D +RG
Sbjct: 104 SATLPYGWSRYAQFSLAVINQIHNKFTIRKDTQHQFNARESDWGFTSFMPLGELYDPARG 163

Query: 569 FLVNDTCIFEISV 607
           +LVNDTCI E  V
Sbjct: 164 YLVNDTCIVEADV 176


>ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
           sativus]
          Length = 466

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 42/134 (31%), Positives = 68/134 (50%)
 Frame = +2

Query: 206 EIQEPISMTCTWEIHGWSKINVPFISCNWLDTGNYKWNLLAYPKGMGIFKNKSLCLAMGA 385
           ++++P  +  TW I  +S++N+     +    G YKW +L +PKG  +  + S+ L + A
Sbjct: 44  QVEDPPPIKFTWRIENFSRLNMKKYYSDSFSVGGYKWRILVFPKGNNV-DHLSMYLDV-A 101

Query: 386 LKSELPLDKEVYAQWTTTIRDQVHGNHKSLIICTGRFGLNTSRLTANDVLPIGELNDQSR 565
               LP     YAQ++  + +QVH  +        +F    S       +P+ +L D SR
Sbjct: 102 DSGTLPYGWSRYAQFSLAVVNQVHKKYSIRKDTKHQFNARESDWGFTSFMPLSDLYDPSR 161

Query: 566 GFLVNDTCIFEISV 607
           G+LVNDTCI E  V
Sbjct: 162 GYLVNDTCIVEAEV 175


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