BLASTX nr result

ID: Coptis21_contig00023738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023738
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24266.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002270722.1| PREDICTED: uncharacterized protein LOC100255...   110   2e-22
ref|NP_001031906.1| RPM1-interacting protein 4 (RIN4) family pro...    92   4e-17
ref|XP_002871888.1| hypothetical protein ARALYDRAFT_488838 [Arab...    88   6e-16
ref|XP_004148448.1| PREDICTED: uncharacterized protein LOC101211...    87   2e-15

>emb|CBI24266.3| unnamed protein product [Vitis vinifera]
          Length = 135

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
 Frame = +2

Query: 17  MENRREKPVWMSVPQFGGWDHKTGAAPDYSMVFTRARANRKEVKNDITRSSIGNEQEL-- 190
           MENR+EK  WMSVPQFGGWD KTG A +YSM+F++ARAN+K+ K DI  +S+GNE+EL  
Sbjct: 48  MENRKEKNAWMSVPQFGGWDQKTGGATNYSMIFSQARANKKQQKADI-NNSLGNERELTP 106

Query: 191 ---IVHNDQDDAIARKKKILTYFNCCIK 265
                H  Q++++ RK+K LTY NCCI+
Sbjct: 107 RRQYPHQQQEESVMRKRKFLTYINCCIR 134


>ref|XP_002270722.1| PREDICTED: uncharacterized protein LOC100255134 [Vitis vinifera]
          Length = 88

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/88 (57%), Positives = 67/88 (76%), Gaps = 5/88 (5%)
 Frame = +2

Query: 17  MENRREKPVWMSVPQFGGWDHKTGAAPDYSMVFTRARANRKEVKNDITRSSIGNEQEL-- 190
           MENR+EK  WMSVPQFGGWD KTG A +YSM+F++ARAN+K+ K DI  +S+GNE+EL  
Sbjct: 1   MENRKEKNAWMSVPQFGGWDQKTGGATNYSMIFSQARANKKQQKADI-NNSLGNERELTP 59

Query: 191 ---IVHNDQDDAIARKKKILTYFNCCIK 265
                H  Q++++ RK+K LTY NCCI+
Sbjct: 60  RRQYPHQQQEESVMRKRKFLTYINCCIR 87


>ref|NP_001031906.1| RPM1-interacting protein 4 (RIN4) family protein [Arabidopsis
           thaliana] gi|332005330|gb|AED92713.1| RPM1-interacting
           protein 4 (RIN4) family protein [Arabidopsis thaliana]
          Length = 99

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/97 (49%), Positives = 62/97 (63%), Gaps = 14/97 (14%)
 Frame = +2

Query: 17  MENRREKPVWMSVPQFGGWDHK-TGAAPDYSMVFTRARANRKEVKNDITRSSIGNEQELI 193
           M+ RRE   W  VPQFGGWD K    A +YS+VF++ARANRK+ K  +  SS+G+EQEL+
Sbjct: 1   MDKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELM 60

Query: 194 V------------HNDQ-DDAIARKKKILTYFNCCIK 265
           V            H  Q DD + +KK+ILTY NCCI+
Sbjct: 61  VSVRRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97


>ref|XP_002871888.1| hypothetical protein ARALYDRAFT_488838 [Arabidopsis lyrata subsp.
           lyrata] gi|297317725|gb|EFH48147.1| hypothetical protein
           ARALYDRAFT_488838 [Arabidopsis lyrata subsp. lyrata]
          Length = 99

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 14/97 (14%)
 Frame = +2

Query: 17  MENRREKPVWMSVPQFGGWDHK-TGAAPDYSMVFTRARANRKEVKNDITRSSIGNEQELI 193
           M+ RRE   W  VPQFGGWD K    A +YS+VF++ARANRK+ K  +  SS+G+EQEL+
Sbjct: 1   MDKRRENAGWTPVPQFGGWDQKGPNDATNYSVVFSQARANRKQNKAVVRHSSLGSEQELM 60

Query: 194 V------------HNDQ-DDAIARKKKILTYFNCCIK 265
                        H  Q DD + +KK+ILTY NCCI+
Sbjct: 61  ASVRRNHQQLHHRHETQDDDPVMKKKRILTYINCCIR 97


>ref|XP_004148448.1| PREDICTED: uncharacterized protein LOC101211284 [Cucumis sativus]
           gi|449503052|ref|XP_004161817.1| PREDICTED:
           uncharacterized protein LOC101229004 [Cucumis sativus]
          Length = 104

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 21/105 (20%)
 Frame = +2

Query: 17  MENRREKPV-WMSVPQFGGWDHKTGAAPDYSMVFTRARANRKEVKNDITRSSIGNEQELI 193
           ME+R+EK   WMSVPQFG W+ K G  PDYS+ F++ R NRK+ K D++R+SIGNE+EL+
Sbjct: 1   MEDRKEKVAPWMSVPQFGDWEQK-GGVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELM 59

Query: 194 V------------HNDQDDAI--------ARKKKILTYFNCCIKA 268
                        H D++  +          +K IL YFNCC+KA
Sbjct: 60  ASSATPTTNTPHSHVDENHQLNPTNSNSPTTRKSILRYFNCCVKA 104


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