BLASTX nr result

ID: Coptis21_contig00023731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023731
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280016.1| PREDICTED: disease resistance protein At4g27...   103   6e-20
ref|NP_194449.1| NB-ARC domain-containing disease resistance pro...   101   2e-19
ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichoca...   101   2e-19
ref|XP_002869574.1| hypothetical protein ARALYDRAFT_354079 [Arab...   100   4e-19
ref|XP_002333828.1| BED finger-nbs resistance protein [Populus t...    99   9e-19

>ref|XP_002280016.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 976

 Score =  103 bits (256), Expect = 6e-20
 Identities = 70/199 (35%), Positives = 100/199 (50%)
 Frame = +2

Query: 2    RKISLMRNRISFLDDLPXXXXXXXXXXXRENTFLYDISPSFFSKMFSLQVLDISCTGIAE 181
            +++S M N +  L +             ++N  L  +   FF    +L+VL++S T I  
Sbjct: 511  KRVSFMLNSLKSLPNCVMQCSEVSTLLLQDNPLLRRVPEDFFVGFLALKVLNMSGTHIRR 570

Query: 182  LPSSLSDLVCLHGLFLQQCTSLRKIPPVENLKALRFLNLRGTSISELPAGMETLVSLRFL 361
            LP SL  L  LH L L+ C  L ++PP+ +L  L+ L+  GT I ELP  ME L +LR L
Sbjct: 571  LPLSLLQLGQLHSLLLRDCIYLEELPPLGSLNRLQVLDCNGTGIKELPNEMEQLSNLRVL 630

Query: 362  DLSETKNLVNIRAGVISSLWGLEELHLQGSRVCKMDTPQAANSLKEIRCLTQLQILTLSA 541
            +LS T  L  I+AGV+S L GLE L +  S   K    +   SL+E+ CL QL   ++  
Sbjct: 631  NLSRTDYLKTIQAGVVSELSGLEILDMTHSNY-KWGVKEGQASLEELGCLEQLIFCSIG- 688

Query: 542  VGFGDHLDTIMCLQEQNLV 598
                  LD   C   + LV
Sbjct: 689  ------LDRNTCTASEELV 701


>ref|NP_194449.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
            thaliana] gi|46396029|sp|Q9T048.1|DRL27_ARATH RecName:
            Full=Disease resistance protein At4g27190
            gi|4490715|emb|CAB38849.1| putative protein [Arabidopsis
            thaliana] gi|7269572|emb|CAB79574.1| putative protein
            [Arabidopsis thaliana] gi|91806730|gb|ABE66092.1| disease
            resistance protein [Arabidopsis thaliana]
            gi|332659911|gb|AEE85311.1| NB-ARC domain-containing
            disease resistance protein [Arabidopsis thaliana]
          Length = 985

 Score =  101 bits (252), Expect = 2e-19
 Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 5/183 (2%)
 Frame = +2

Query: 2    RKISLMRNRISFLDDLPXXXXXXXXXXXRENTFLYDISPSFFSKMF-SLQVLDISCTGIA 178
            R++SLM N++  L DL             +  FL    P  F + F +L++L++S T I 
Sbjct: 504  RRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNFLLKEVPIGFLQAFPTLRILNLSGTRIK 563

Query: 179  ELPS-SLSDLVCLHGLFLQQCTSLRKIPPVENLKALRFLNLRGTSISELPAGMETLVSLR 355
              PS SL  L  LH LFL+ C  L K+P +E L  L  L+L GT I E P G+E L   R
Sbjct: 564  SFPSCSLLRLFSLHSLFLRDCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFR 623

Query: 356  FLDLSETKNLVNIRAGVISSLWGLEELHLQGSRV---CKMDTPQAANSLKEIRCLTQLQI 526
             LDLS T +L +I A V+S L  LE L +  S      + +T +   +++EI CL +LQ+
Sbjct: 624  HLDLSRTLHLESIPARVVSRLSSLETLDMTSSHYRWSVQGETQKGQATVEEIGCLQRLQV 683

Query: 527  LTL 535
            L++
Sbjct: 684  LSI 686


>ref|XP_002317520.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860585|gb|EEE98132.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 802

 Score =  101 bits (251), Expect = 2e-19
 Identities = 61/148 (41%), Positives = 88/148 (59%)
 Frame = +2

Query: 86  RENTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSDLVCLHGLFLQQCTSLRKIPPV 265
           ++N  L  I  SFF+++  L VLD+S TGI  LP S+S+LVCL  L L++C  LR +P +
Sbjct: 364 QKNYMLRSIEGSFFTQLNGLAVLDLSNTGIKSLPGSISNLVCLTSLLLRRCQQLRHVPTL 423

Query: 266 ENLKALRFLNLRGTSISELPAGMETLVSLRFLDLSETKNLVNIRAGVISSLWGLEELHLQ 445
             L AL+ L+L  T + ELP GM+ L +LR+LDLS T+ L  + AG++  L  L+ L   
Sbjct: 424 AKLTALKKLDLVYTQLEELPEGMKLLSNLRYLDLSHTR-LKQLSAGILPKLCRLQVL--- 479

Query: 446 GSRVCKMDTPQAANSLKEIRCLTQLQIL 529
             RV      Q     +E+ CL +L+ L
Sbjct: 480 --RVLLSSETQVTLKGEEVACLKRLEAL 505


>ref|XP_002869574.1| hypothetical protein ARALYDRAFT_354079 [Arabidopsis lyrata subsp.
           lyrata] gi|297315410|gb|EFH45833.1| hypothetical protein
           ARALYDRAFT_354079 [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score =  100 bits (249), Expect = 4e-19
 Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 3/184 (1%)
 Frame = +2

Query: 2   RKISLMRNRISFLDDLPXXXXXXXXXXXRENTFLYDISPSFFSKMFSLQVLDISCTGIAE 181
           R++SLM N++  L D             + N  L  +   F     +L++L++S T I+ 
Sbjct: 69  RRVSLMNNKLKKLPDQVVECVELSALLLQGNFHLEALPVGFLLSFPALRILNLSGTRISS 128

Query: 182 LPSSLSDLVCLHGLFLQQCTSLRKIPPVENLKALRFLNLRGTSISELPAGMETLVSLRFL 361
           LP SLS+L  L  L L+ C  L ++P +E L  ++ L+L  T I ELP G+ETL SLR L
Sbjct: 129 LPLSLSELHELRSLILRDCYYLEEVPSLEKLTKIQVLDLCATRIKELPTGLETLNSLRLL 188

Query: 362 DLSETKNLVNIRAGVISSLWGLEELHLQGSRV---CKMDTPQAANSLKEIRCLTQLQILT 532
           DLS T +L +I AG+I  L  LE L +  S      +  T +   +L++I CL  L +L+
Sbjct: 189 DLSRTHHLESIPAGIIQHLSSLEVLDMTLSHFHWGVQGQTQEGQATLEDIACLHCLLVLS 248

Query: 533 LSAV 544
           +  V
Sbjct: 249 IRVV 252


>ref|XP_002333828.1| BED finger-nbs resistance protein [Populus trichocarpa]
           gi|222838647|gb|EEE77012.1| BED finger-nbs resistance
           protein [Populus trichocarpa]
          Length = 1153

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 61/147 (41%), Positives = 86/147 (58%)
 Frame = +2

Query: 89  ENTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSDLVCLHGLFLQQCTSLRKIPPVE 268
           +N  L  I  SFF+++  L VLD+S TGI  LP S+S+LVCL  L L++C  LR +P + 
Sbjct: 511 QNYMLRSIEGSFFTQLNGLAVLDLSNTGIKSLPGSISNLVCLTSLLLRRCQQLRHVPTLA 570

Query: 269 NLKALRFLNLRGTSISELPAGMETLVSLRFLDLSETKNLVNIRAGVISSLWGLEELHLQG 448
            L AL+ L+L  T + ELP GM+ L +LR+LDLS T+ L  + AG+I  L  L+ L    
Sbjct: 571 KLTALKKLDLVYTQLEELPEGMKLLSNLRYLDLSHTR-LKQLSAGIIPKLCRLQVL---- 625

Query: 449 SRVCKMDTPQAANSLKEIRCLTQLQIL 529
             V      Q     +E+ CL +L+ L
Sbjct: 626 -GVLLSSETQVTLKGEEVACLKRLEAL 651



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 59/145 (40%), Positives = 84/145 (57%)
 Frame = +2

Query: 92   NTFLYDISPSFFSKMFSLQVLDISCTGIAELPSSLSDLVCLHGLFLQQCTSLRKIPPVEN 271
            N  L  I  SFF+++  L VLD+S TGI  LP S+S+LVCL  L L++C  LR +P +  
Sbjct: 840  NYMLRSIEGSFFTQLNGLAVLDLSNTGIKSLPGSISNLVCLTSLLLRRCQQLRHVPTLAK 899

Query: 272  LKALRFLNLRGTSISELPAGMETLVSLRFLDLSETKNLVNIRAGVISSLWGLEELHLQGS 451
            L AL+ L+L  T + ELP GM+ L +LR+LDLS T+ L  + AG+I  L  L+ L     
Sbjct: 900  LTALKKLDLVYTQLEELPEGMKLLSNLRYLDLSHTR-LKQLSAGIIPKLCRLQVL----- 953

Query: 452  RVCKMDTPQAANSLKEIRCLTQLQI 526
             V      Q     +E+ CL + ++
Sbjct: 954  GVLLSSETQVTLKGEEVACLKRSRV 978


Top