BLASTX nr result

ID: Coptis21_contig00023726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023726
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25172.3| unnamed protein product [Vitis vinifera]              291   2e-76
ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   291   2e-76
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   282   7e-74
ref|XP_002512723.1| multidrug resistance-associated protein, put...   278   1e-72
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...   277   2e-72

>emb|CBI25172.3| unnamed protein product [Vitis vinifera]
          Length = 1205

 Score =  291 bits (744), Expect = 2e-76
 Identities = 144/208 (69%), Positives = 170/208 (81%)
 Frame = +2

Query: 5    LGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRDLRSHFSVVPQSPFLFEG 184
            +GIIGRTGAGKSS+LNALFRLTPIC G ILVD L++AD+ +RDLRSHF+VVPQSPFLFEG
Sbjct: 998  VGIIGRTGAGKSSILNALFRLTPICKGCILVDGLDIADVPVRDLRSHFAVVPQSPFLFEG 1057

Query: 185  SLRDNLDPYGMINDSMIWETLEKCHVKDEVEAAGGLEINIKEGGMSFSVGXXXXXXXXXX 364
            SLRDNLDP+ + +D  IW+TLE+CHVK+EVE AGGL+I++KE G SFSVG          
Sbjct: 1058 SLRDNLDPFRVSDDLKIWKTLERCHVKEEVEVAGGLDIHVKESGTSFSVGQRQLLCLARA 1117

Query: 365  XXXXXXVLCLDECSANIDTQTASSLQNAISSHCENMTVLTIAHRISTVMNMNNILILDQG 544
                  VLCLDEC+ANID QT+S LQNAI + C  MTV+TIAHRISTV++M+NILILD+G
Sbjct: 1118 LLKSSKVLCLDECTANIDAQTSSVLQNAILTECRGMTVITIAHRISTVLSMDNILILDRG 1177

Query: 545  VLVEQGDPQALLQDESSRFSSFANASIM 628
            +LVEQG+PQ LLQD SSRFS FA AS M
Sbjct: 1178 ILVEQGNPQVLLQDHSSRFSGFAKASTM 1205



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
 Frame = +2

Query: 5   LGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRDLRSHFSVVPQSPFLFEG 184
           + IIG  G+GKSS+LN++ +   +  G I  D                + VPQ P++  G
Sbjct: 367 VAIIGEVGSGKSSLLNSILKEMRLIHGSIYSD-------------GSITYVPQVPWILSG 413

Query: 185 SLRDNLDPYGMINDSMIWETLEKCHVKDEVE-AAGGLEINIKEGGMSFSVGXXXXXXXXX 361
           ++R+N+      + +   + LE C +  ++    GG    I + G++ S G         
Sbjct: 414 TIRENILFGKAYDPTRYSDVLEACALDIDISLMVGGDMAYIGDKGVNLSGGQRARLALAR 473

Query: 362 XXXXXXXVLCLDECSANIDTQTASS-LQNAISSHCENM-TVLTIAHRISTVMNMNNILIL 535
                  +  LD+  + +DTQ A   L NAI     N  T +   H I  + + + I+++
Sbjct: 474 AIYHGSDIFMLDDVLSAVDTQVARCILHNAILGPLMNQHTRVLCTHNIQAMSSADMIVVM 533

Query: 536 DQG 544
           D+G
Sbjct: 534 DKG 536


>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  291 bits (744), Expect = 2e-76
 Identities = 144/208 (69%), Positives = 170/208 (81%)
 Frame = +2

Query: 5    LGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRDLRSHFSVVPQSPFLFEG 184
            +GIIGRTGAGKSS+LNALFRLTPIC G ILVD L++AD+ +RDLRSHF+VVPQSPFLFEG
Sbjct: 1098 VGIIGRTGAGKSSILNALFRLTPICKGCILVDGLDIADVPVRDLRSHFAVVPQSPFLFEG 1157

Query: 185  SLRDNLDPYGMINDSMIWETLEKCHVKDEVEAAGGLEINIKEGGMSFSVGXXXXXXXXXX 364
            SLRDNLDP+ + +D  IW+TLE+CHVK+EVE AGGL+I++KE G SFSVG          
Sbjct: 1158 SLRDNLDPFRVSDDLKIWKTLERCHVKEEVEVAGGLDIHVKESGTSFSVGQRQLLCLARA 1217

Query: 365  XXXXXXVLCLDECSANIDTQTASSLQNAISSHCENMTVLTIAHRISTVMNMNNILILDQG 544
                  VLCLDEC+ANID QT+S LQNAI + C  MTV+TIAHRISTV++M+NILILD+G
Sbjct: 1218 LLKSSKVLCLDECTANIDAQTSSVLQNAILTECRGMTVITIAHRISTVLSMDNILILDRG 1277

Query: 545  VLVEQGDPQALLQDESSRFSSFANASIM 628
            +LVEQG+PQ LLQD SSRFS FA AS M
Sbjct: 1278 ILVEQGNPQVLLQDHSSRFSGFAKASTM 1305



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
 Frame = +2

Query: 5    LGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRDLRSHFSVVPQSPFLFEG 184
            + IIG  G+GKSS+LN++ +   +  G I  D                + VPQ P++  G
Sbjct: 485  VAIIGEVGSGKSSLLNSILKEMRLIHGSIYSD-------------GSITYVPQVPWILSG 531

Query: 185  SLRDNLDPYGMINDSMIWETLEKCHVKDEVE-AAGGLEINIKEGGMSFSVGXXXXXXXXX 361
            ++R+N+      + +   + LE C +  ++    GG    I + G++ S G         
Sbjct: 532  TIRENILFGKAYDPTRYSDVLEACALDIDISLMVGGDMAYIGDKGVNLSGGQRARLALAR 591

Query: 362  XXXXXXXVLCLDECSANIDTQTASS-LQNAISSHCENM-TVLTIAHRISTVMNMNNILIL 535
                   +  LD+  + +DTQ A   L NAI     N  T +   H I  + + + I+++
Sbjct: 592  AIYHGSDIFMLDDVLSAVDTQVARCILHNAILGPLMNQHTRVLCTHNIQAMSSADMIVVM 651

Query: 536  DQGVLVEQGDPQALLQDESSRFSSFANASIM*LEFTLS 649
            D+G +   G          S +S+F + +    EFT+S
Sbjct: 652  DKGHVKWVGSSTDF---SVSSYSTFCSLN----EFTVS 682


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1426

 Score =  282 bits (721), Expect = 7e-74
 Identities = 139/208 (66%), Positives = 168/208 (80%)
 Frame = +2

Query: 5    LGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRDLRSHFSVVPQSPFLFEG 184
            +G++GRTGAGKSS+LNALFRLTPIC G I+VD L++ D+ +RDLR  F+VVPQSPFLFEG
Sbjct: 1219 VGVVGRTGAGKSSILNALFRLTPICSGCIVVDGLDITDVPVRDLRPRFAVVPQSPFLFEG 1278

Query: 185  SLRDNLDPYGMINDSMIWETLEKCHVKDEVEAAGGLEINIKEGGMSFSVGXXXXXXXXXX 364
            SLRDNLDP+ M ND  IW+ LEKCHVK+EVE+AGGL+I++KE G SFSVG          
Sbjct: 1279 SLRDNLDPFQMNNDLKIWDILEKCHVKEEVESAGGLDIHVKESGSSFSVGQRQLLCLARA 1338

Query: 365  XXXXXXVLCLDECSANIDTQTASSLQNAISSHCENMTVLTIAHRISTVMNMNNILILDQG 544
                  VLCLDEC+AN+DT+TAS L++ I S C  MTV+TIAHRISTV+NM+NIL+LD+G
Sbjct: 1339 LLKLSKVLCLDECTANVDTKTASILRSTIFSECRAMTVITIAHRISTVLNMDNILVLDRG 1398

Query: 545  VLVEQGDPQALLQDESSRFSSFANASIM 628
             LVEQG+P+ALLQDESS FSSFA AS M
Sbjct: 1399 NLVEQGNPKALLQDESSIFSSFAKASTM 1426


>ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus communis]
            gi|223547734|gb|EEF49226.1| multidrug
            resistance-associated protein, putative [Ricinus
            communis]
          Length = 1395

 Score =  278 bits (711), Expect = 1e-72
 Identities = 138/208 (66%), Positives = 166/208 (79%)
 Frame = +2

Query: 5    LGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRDLRSHFSVVPQSPFLFEG 184
            +GI+GRTGAGKSS+LNALFRL+PI GG ILVD LN+ D+ +RDLR+HFSVVPQ+PFLFEG
Sbjct: 1188 VGIVGRTGAGKSSILNALFRLSPISGGCILVDGLNIIDVPVRDLRAHFSVVPQTPFLFEG 1247

Query: 185  SLRDNLDPYGMINDSMIWETLEKCHVKDEVEAAGGLEINIKEGGMSFSVGXXXXXXXXXX 364
            SLRDNLDP    +D  IW TLE+CH+K+EVE AGGL+  +K  G SFSVG          
Sbjct: 1248 SLRDNLDPLQTSSDLKIWSTLEQCHIKEEVEMAGGLDALVKGSGSSFSVGQRQLLCLARA 1307

Query: 365  XXXXXXVLCLDECSANIDTQTASSLQNAISSHCENMTVLTIAHRISTVMNMNNILILDQG 544
                  VLCLDEC+AN+DTQTAS LQNAIS+ CE MTV+TIAHRISTVMNM++IL+LD+G
Sbjct: 1308 LLKSSRVLCLDECTANVDTQTASILQNAISTECEGMTVITIAHRISTVMNMDHILVLDRG 1367

Query: 545  VLVEQGDPQALLQDESSRFSSFANASIM 628
             ++EQG+PQALL+D  +RFSSFA AS M
Sbjct: 1368 NVIEQGNPQALLRDGFTRFSSFAKASTM 1395


>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
          Length = 2377

 Score =  277 bits (708), Expect = 2e-72
 Identities = 132/208 (63%), Positives = 170/208 (81%)
 Frame = +2

Query: 5    LGIIGRTGAGKSSVLNALFRLTPICGGRILVDRLNVADISIRDLRSHFSVVPQSPFLFEG 184
            +GIIGRTGAGKSS+LN+LFRLTP+C GRILVD +++A++ +RDLR HF+VVPQ+PFLFEG
Sbjct: 2170 VGIIGRTGAGKSSILNSLFRLTPVCAGRILVDGIDIAEVPVRDLRMHFAVVPQTPFLFEG 2229

Query: 185  SLRDNLDPYGMINDSMIWETLEKCHVKDEVEAAGGLEINIKEGGMSFSVGXXXXXXXXXX 364
            SLR+NLDP+ + +D  I E LE+C+++ E+EAAGGL+ ++KE G+SFSVG          
Sbjct: 2230 SLRENLDPFHLYDDQKILEVLERCYIRREIEAAGGLDFHVKESGLSFSVGQRQLLCLVRA 2289

Query: 365  XXXXXXVLCLDECSANIDTQTASSLQNAISSHCENMTVLTIAHRISTVMNMNNILILDQG 544
                  VLCLDEC+ANIDTQTA+ LQN IS+ C  MTV+TIAHRISTV+NM++ILILD G
Sbjct: 2290 LLKSSKVLCLDECTANIDTQTAALLQNTISNECRGMTVITIAHRISTVLNMDDILILDYG 2349

Query: 545  VLVEQGDPQALLQDESSRFSSFANASIM 628
            +LVEQG+PQ LL++ESS+FS+F NAS M
Sbjct: 2350 ILVEQGNPQDLLENESSKFSNFVNASKM 2377


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