BLASTX nr result

ID: Coptis21_contig00023722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023722
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA37434.1| TPA: general regulatory factor1 [Zea mays]             41   2e-06
ref|XP_002870838.1| hypothetical protein ARALYDRAFT_494127 [Arab...    39   4e-06
gb|ACN39847.1| unknown [Picea sitchensis] gi|224284399|gb|ACN399...    38   5e-06
gb|AEZ00871.1| putative 14-3-3 regulatory [Elaeis guineensis]          40   5e-06
gb|ABD96912.1| hypothetical protein [Cleome spinosa]                   40   6e-06

>tpg|DAA37434.1| TPA: general regulatory factor1 [Zea mays]
          Length = 278

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -1

Query: 386 AYETVTEARWASWNAVYFVDLEEDNKGSE-RVGMILMYRSKIELSLTRYIMG 234
           AY+ V  AR ASW  +  ++ +E+ +G+E RV +I  YR KIE  LT+   G
Sbjct: 71  AYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDG 122



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 17/39 (43%), Positives = 30/39 (76%)
 Frame = -2

Query: 559 KLDIAKMAVESSCKQNVHMAKLAGRAGRHEEMLKFIKQL 443
           KL+    + E S ++NV+MAKLA +A R+EEM++F++++
Sbjct: 13  KLNCKMASAELSREENVYMAKLAEQAERYEEMVEFMEKV 51


>ref|XP_002870838.1| hypothetical protein ARALYDRAFT_494127 [Arabidopsis lyrata subsp.
           lyrata] gi|297316674|gb|EFH47097.1| hypothetical protein
           ARALYDRAFT_494127 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score = 39.3 bits (90), Expect(2) = 4e-06
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -1

Query: 386 AYETVTEARWASWNAVYFVDLEEDNKGSE-RVGMILMYRSKIELSLTRYIMG 234
           AY+ V  AR ASW  +  ++ +E++KG+E  V +I  YR KIE  L++   G
Sbjct: 53  AYKNVIGARRASWRIISSIEQKEESKGNEDHVAIIKDYRGKIETELSKICDG 104



 Score = 37.4 bits (85), Expect(2) = 4e-06
 Identities = 16/33 (48%), Positives = 29/33 (87%)
 Frame = -2

Query: 541 MAVESSCKQNVHMAKLAGRAGRHEEMLKFIKQL 443
           M+ E+S ++NV+MAKLA +A R+EEM++F++++
Sbjct: 1   MSTEASREENVYMAKLAEQAERYEEMVEFMEKV 33


>gb|ACN39847.1| unknown [Picea sitchensis] gi|224284399|gb|ACN39934.1| unknown
           [Picea sitchensis] gi|224286081|gb|ACN40751.1| unknown
           [Picea sitchensis]
          Length = 264

 Score = 38.1 bits (87), Expect(2) = 5e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -2

Query: 547 AKMAVESSCKQNVHMAKLAGRAGRHEEMLKFIKQL 443
           A   VESS ++NV+MAKLA +A R+EEM++F++++
Sbjct: 3   AAAMVESSREENVYMAKLAEQAERYEEMVEFMEKV 37



 Score = 38.1 bits (87), Expect(2) = 5e-06
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -1

Query: 386 AYETVTEARWASWNAVYFVDLEEDNKGS-ERVGMILMYRSKIELSLTRYIMGF*R 225
           AY+ V  AR ASW  +  ++ +E+++G+ E V  I  YRSK+E  L++   G  R
Sbjct: 57  AYKNVIGARRASWRIISSIEQKEESRGNDEHVVTIREYRSKVESELSKICEGILR 111


>gb|AEZ00871.1| putative 14-3-3 regulatory [Elaeis guineensis]
          Length = 261

 Score = 40.0 bits (92), Expect(2) = 5e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = -1

Query: 386 AYETVTEARWASWNAVYFVDLEEDNKGSE-RVGMILMYRSKIELSLTRYIMG 234
           AY+ V  AR ASW  +  ++ +E+++G+E RV +I  YR KIE  L++   G
Sbjct: 54  AYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKEYRGKIEAELSKICDG 105



 Score = 36.2 bits (82), Expect(2) = 5e-06
 Identities = 16/30 (53%), Positives = 27/30 (90%)
 Frame = -2

Query: 532 ESSCKQNVHMAKLAGRAGRHEEMLKFIKQL 443
           ESS ++NV+MAKLA +A R+EEM++F++++
Sbjct: 5   ESSREENVYMAKLAEQAERYEEMVEFMEKV 34


>gb|ABD96912.1| hypothetical protein [Cleome spinosa]
          Length = 272

 Score = 40.0 bits (92), Expect(2) = 6e-06
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -1

Query: 386 AYETVTEARWASWNAVYFVDLEEDNKGSE-RVGMILMYRSKIELSLTRYIMG 234
           AY+ V  AR ASW  +  ++ +E+++G+E  V MI  YR KIE  L++   G
Sbjct: 54  AYKNVIGARRASWRIISSIEQKEESRGNEDHVSMIKEYRGKIEAELSKICDG 105



 Score = 35.8 bits (81), Expect(2) = 6e-06
 Identities = 15/32 (46%), Positives = 28/32 (87%)
 Frame = -2

Query: 532 ESSCKQNVHMAKLAGRAGRHEEMLKFIKQLQN 437
           +S+ ++NV+MAKLA +A R+EEM++F++++ N
Sbjct: 5   DSTREENVYMAKLAEQAERYEEMVEFMEKVAN 36


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