BLASTX nr result

ID: Coptis21_contig00023720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023720
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20493.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002280117.1| PREDICTED: formin-like protein 5-like [Vitis...   127   1e-27
emb|CAN77532.1| hypothetical protein VITISV_009172 [Vitis vinifera]   125   3e-27
ref|XP_002317562.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002274950.1| PREDICTED: uncharacterized protein LOC100258...   122   4e-26

>emb|CBI20493.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/107 (62%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
 Frame = +3

Query: 9   FHRSLRSFVEHAEVEITCLLEEEKRIMSLVKNTVDCFHGRAGKDEGLLLFVIVRDFLLIL 188
           F ++L SFV+HAEV+IT LLEEEKRI +LVK+T+D FHG AGKDEGL LFVIVRDFL++L
Sbjct: 379 FCQTLESFVQHAEVDITWLLEEEKRITALVKSTIDYFHGNAGKDEGLRLFVIVRDFLIML 438

Query: 189 DKTCEEVSKSTKMVPREPINRESPTV-PPADTQKSPSPDLRQRLFPA 326
           DK C++V  + K  PR P  +E PT  P +DT++  SPD+RQ+LFPA
Sbjct: 439 DKACKQVRDAPKK-PR-PQKKEVPTAQPSSDTRQPASPDIRQKLFPA 483


>ref|XP_002280117.1| PREDICTED: formin-like protein 5-like [Vitis vinifera]
          Length = 1004

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/107 (62%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
 Frame = +3

Query: 9    FHRSLRSFVEHAEVEITCLLEEEKRIMSLVKNTVDCFHGRAGKDEGLLLFVIVRDFLLIL 188
            F ++L SFV+HAEV+IT LLEEEKRI +LVK+T+D FHG AGKDEGL LFVIVRDFL++L
Sbjct: 884  FCQTLESFVQHAEVDITWLLEEEKRITALVKSTIDYFHGNAGKDEGLRLFVIVRDFLIML 943

Query: 189  DKTCEEVSKSTKMVPREPINRESPTV-PPADTQKSPSPDLRQRLFPA 326
            DK C++V  + K  PR P  +E PT  P +DT++  SPD+RQ+LFPA
Sbjct: 944  DKACKQVRDAPKK-PR-PQKKEVPTAQPSSDTRQPASPDIRQKLFPA 988


>emb|CAN77532.1| hypothetical protein VITISV_009172 [Vitis vinifera]
          Length = 910

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/108 (62%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3    SEFHRSLRSFVEHAEVEITCLLEEEKRIMSLVKNTVDCFHGRAGKDEGLLLFVIVRDFLL 182
            S+FHRSL SFVE AEV+IT +LEEE RIM+LV++TVD FHG +GKDEGL LF IVRDFL 
Sbjct: 782  SDFHRSLASFVERAEVDITWMLEEENRIMTLVRSTVDYFHGHSGKDEGLRLFAIVRDFLK 841

Query: 183  ILDKTCEEVSKSTKMVPREPINRESPTV-PPADTQKSPSPDLRQRLFP 323
            ILDK C EV KST    + P   E+PTV  P +  +S   D+RQ+LFP
Sbjct: 842  ILDKVCNEVRKSTIKPTKNP-KTEAPTVSAPPEVHQSSLQDMRQKLFP 888


>ref|XP_002317562.1| predicted protein [Populus trichocarpa] gi|222860627|gb|EEE98174.1|
            predicted protein [Populus trichocarpa]
          Length = 983

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/108 (56%), Positives = 80/108 (74%)
 Frame = +3

Query: 3    SEFHRSLRSFVEHAEVEITCLLEEEKRIMSLVKNTVDCFHGRAGKDEGLLLFVIVRDFLL 182
            S FH +L+SFV++AEV+I  LLEEEKRI++LVK+T D F+G AGKDEGL LF++VRDFL+
Sbjct: 859  SGFHETLKSFVQNAEVDIMSLLEEEKRIVALVKSTGDYFYGNAGKDEGLRLFIVVRDFLI 918

Query: 183  ILDKTCEEVSKSTKMVPREPINRESPTVPPADTQKSPSPDLRQRLFPA 326
            ILDK C+EV ++ K   +      S    P+   + PSPD+RQRLFPA
Sbjct: 919  ILDKVCKEVGEAQKRSAKTRKKEASTASSPSHKHQQPSPDIRQRLFPA 966


>ref|XP_002274950.1| PREDICTED: uncharacterized protein LOC100258466 [Vitis vinifera]
          Length = 951

 Score =  122 bits (305), Expect = 4e-26
 Identities = 66/108 (61%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3    SEFHRSLRSFVEHAEVEITCLLEEEKRIMSLVKNTVDCFHGRAGKDEGLLLFVIVRDFLL 182
            S+FHRSL SFVE AEV+IT +LEEE RIM+LV+ TVD FHG +GKDEGL LF IVRDFL 
Sbjct: 823  SDFHRSLDSFVERAEVDITWMLEEENRIMTLVRGTVDYFHGHSGKDEGLRLFAIVRDFLK 882

Query: 183  ILDKTCEEVSKSTKMVPREPINRESPTVPP-ADTQKSPSPDLRQRLFP 323
            ILDK C EV KST    + P   E+PTV    +  +S   D+RQ+LFP
Sbjct: 883  ILDKVCNEVRKSTIKPTKNP-KTEAPTVSAHPEVHQSSLQDMRQKLFP 929


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