BLASTX nr result

ID: Coptis21_contig00023714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023714
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81691.1| hypothetical protein VITISV_009756 [Vitis vinifera]    61   8e-08
emb|CAN63734.1| hypothetical protein VITISV_037247 [Vitis vinifera]    59   2e-07
emb|CAN68252.1| hypothetical protein VITISV_043921 [Vitis vinifera]    59   2e-07
emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]    60   2e-07
emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]    60   2e-07

>emb|CAN81691.1| hypothetical protein VITISV_009756 [Vitis vinifera]
          Length = 356

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -1

Query: 263 RVVFFCWGAFLDMI-QIDNLNWRGINIDSVCVYCKVVEEDVDHLLLNCPITFRIWAPFFA 87
           +V FF W A  + I  +D L  RG  + + C  C   EE+V+H+LL+C +   +W   FA
Sbjct: 130 KVAFFAWEATWEKILTLDRLQMRGWQLPNCCFLCGCEEENVNHILLHCTVVRTLWEIAFA 189

Query: 86  SFNVTWAPSSKIKEAL 39
            F V W    K+KEAL
Sbjct: 190 LFGVQWVFLEKVKEAL 205


>emb|CAN63734.1| hypothetical protein VITISV_037247 [Vitis vinifera]
          Length = 460

 Score = 58.5 bits (140), Expect(2) = 2e-07
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -1

Query: 263 RVVFFCWGA-FLDMIQIDNLNWRGINIDSVCVYCKVVEEDVDHLLLNCPITFRIWAPFFA 87
           +V FF W A +  ++ +D L  RG ++ + C  C    E VDHLLL+C +T  +W   F+
Sbjct: 15  KVAFFAWEASWGKILTLDQLQRRGYSLANRCFLCLAEAETVDHLLLHCVMTRTLWNLLFS 74

Query: 86  SFNVTWAPSSKIKEAL 39
            F V W  S  +KE L
Sbjct: 75  LFGVEWVLSGTVKETL 90



 Score = 21.6 bits (44), Expect(2) = 2e-07
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 300 FPFKRIWKNSIP 265
           FP+  IWK S+P
Sbjct: 2   FPYVGIWKASVP 13


>emb|CAN68252.1| hypothetical protein VITISV_043921 [Vitis vinifera]
          Length = 433

 Score = 58.5 bits (140), Expect(2) = 2e-07
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = -1

Query: 263 RVVFFCWGA-FLDMIQIDNLNWRGINIDSVCVYCKVVEEDVDHLLLNCPITFRIWAPFFA 87
           +V FF W A +  ++ +D L  RG ++ + C  C    E VDHLLL+C +T  +W   F+
Sbjct: 231 KVAFFAWEASWGKILTLDQLQRRGYSLANRCFLCLAEAETVDHLLLHCVMTRTLWNLLFS 290

Query: 86  SFNVTWAPSSKIKEAL 39
            F V W  S  +KE L
Sbjct: 291 LFGVEWVLSGTVKETL 306



 Score = 21.2 bits (43), Expect(2) = 2e-07
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 300 FPFKRIWKNSIP 265
           FP+  IWK S+P
Sbjct: 218 FPYIGIWKASVP 229


>emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]
          Length = 1232

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
 Frame = -1

Query: 278  RTPSHRVVFFCWGA-FLDMIQIDNLNWRGINIDSVCVYCKVVEEDVDHLLLNCPITFRIW 102
            R P+ +V FF W A +  ++ +D L  RG+ + + C  C   EE+V H+LL+C +T  +W
Sbjct: 935  RVPT-KVCFFAWEATWGKVLTLDRLQLRGVQLPNCCYLCGCEEENVHHILLHCIVTRALW 993

Query: 101  APFFASFNVTWAPSSKIKEAL--------GKEYHMLW 15
               F   +V W     +KEAL        GK+   +W
Sbjct: 994  EIIFGLIDVKWVHPETVKEALISWRGSFVGKKRKRIW 1030


>emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]
          Length = 1138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
 Frame = -1

Query: 278 RTPSHRVVFFCWGA-FLDMIQIDNLNWRGINIDSVCVYCKVVEEDVDHLLLNCPITFRIW 102
           R P+ +V FF W A +  ++ +D L  RG+ + + C  C   EE+V H+LL+C +T  +W
Sbjct: 665 RVPT-KVCFFAWEATWGKVLTLDRLQLRGVQLPNCCYLCGCEEENVHHILLHCIVTRALW 723

Query: 101 APFFASFNVTWAPSSKIKEAL--------GKEYHMLW 15
              F   +V W     +KEAL        GK+   +W
Sbjct: 724 EIIFGLIDVKWVHPETVKEALISWRGSFVGKKRKRIW 760


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