BLASTX nr result

ID: Coptis21_contig00023706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023706
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279142.1| PREDICTED: uncharacterized protein LOC100267...   108   5e-22
ref|XP_003622974.1| hypothetical protein MTR_7g058970 [Medicago ...   108   8e-22
gb|AFK42804.1| unknown [Lotus japonicus]                              107   1e-21
gb|ACU20475.1| unknown [Glycine max]                                  107   1e-21
ref|XP_002302844.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_002279142.1| PREDICTED: uncharacterized protein LOC100267059 [Vitis vinifera]
          Length = 107

 Score =  108 bits (271), Expect = 5e-22
 Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 9/107 (8%)
 Frame = +3

Query: 171 MWPLLAAVKRKFGNIRKSSRVADENMSGEGND------GAELHHE---WNFLSVLETVVQ 323
           MW +LAA++R F NIRKS RVADENM G GN       G ++      W+  S + ++V+
Sbjct: 1   MWHMLAAMRRNFQNIRKSPRVADENMFGGGNQAELPIFGRDMERRARGWDGFSAVYSIVR 60

Query: 324 GPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 464
            PL L SC + P V GADG+WV G++   SE+NHLMV+D MRYAILM
Sbjct: 61  VPLSLLSCFSHPHVNGADGVWVSGDFAHISEMNHLMVSDSMRYAILM 107


>ref|XP_003622974.1| hypothetical protein MTR_7g058970 [Medicago truncatula]
           gi|355497989|gb|AES79192.1| hypothetical protein
           MTR_7g058970 [Medicago truncatula]
          Length = 125

 Score =  108 bits (269), Expect = 8e-22
 Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 13/111 (11%)
 Frame = +3

Query: 171 MWPLLAAVKR-KFGNIRKSSRVADENMSGEGNDGAELH------------HEWNFLSVLE 311
           MW L+AAV+R     ++KSS+VADENM  EGN G E+             H W+  SV+ 
Sbjct: 15  MWHLVAAVRRINIYKMKKSSKVADENMFEEGNRGVEVAMFGGERGRRQHGHGWSGFSVIY 74

Query: 312 TVVQGPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 464
            ++Q P+ + SC++ P+V G+DG+W  GE+G+ SEINH+MVND MRYAILM
Sbjct: 75  AILQAPISILSCLSNPRVNGSDGVWSTGEFGQISEINHIMVNDSMRYAILM 125


>gb|AFK42804.1| unknown [Lotus japonicus]
          Length = 100

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/100 (50%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
 Frame = +3

Query: 171 MWPLLAAVKRKFGNIRKSSRVADENMSGEGNDGA--ELHHEWNFLSVLETVVQGPLLLFS 344
           MW L+AAV R   N +KSSRVADE+M   G+D       H+W+  S++  ++  P+ + S
Sbjct: 1   MWRLVAAVTRNLQNTKKSSRVADESMFEAGHDRGIRRSQHDWSGFSLIYAILHAPISILS 60

Query: 345 CVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 464
           CV+ PQ  G DG WV GE+ + SE+NH+MVND MRYAILM
Sbjct: 61  CVSHPQANGVDGAWVSGEFSQISEMNHIMVNDSMRYAILM 100


>gb|ACU20475.1| unknown [Glycine max]
          Length = 107

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 10/108 (9%)
 Frame = +3

Query: 171 MWPLLAAVKRKFGNIRKSSRVADENMSGEGNDGAEL----------HHEWNFLSVLETVV 320
           MW L+AA+ RK  N +K SRVADENMS E  +G EL           H W+ +S++  ++
Sbjct: 1   MWRLVAALTRKLQNTKKGSRVADENMS-EAANGVELAMFRHDRGRRDHGWSGISLIYGIL 59

Query: 321 QGPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 464
             P+ + SCV+ PQ  G+DG+WV GE+ + SE+NHLMVND MRYAILM
Sbjct: 60  HAPISILSCVSHPQANGSDGVWVSGEFVQISEMNHLMVNDSMRYAILM 107


>ref|XP_002302844.1| predicted protein [Populus trichocarpa] gi|222844570|gb|EEE82117.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/107 (53%), Positives = 68/107 (63%), Gaps = 9/107 (8%)
 Frame = +3

Query: 171 MWPLLAAVKRKFGNIRKSSRVADENMSGEGNDGAELH---------HEWNFLSVLETVVQ 323
           MW  LA ++R   NIRKS RVADE+M G G +GAE             WN LS L  +V 
Sbjct: 1   MWHKLARLRRNVQNIRKSPRVADESMFG-GMNGAEFPILVRDMNRAQRWNSLSALFRIVL 59

Query: 324 GPLLLFSCVAQPQVTGADGMWVHGEYGRFSEINHLMVNDGMRYAILM 464
            P  + SC +QP V GADG+WV GE+ + SE+NHLMVND MRYAILM
Sbjct: 60  APFSILSCSSQPHVNGADGLWVTGEFAQLSEMNHLMVNDSMRYAILM 106


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