BLASTX nr result

ID: Coptis21_contig00023700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023700
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136065.1| PREDICTED: elongation factor Tu, mitochondri...    77   4e-12
gb|AFL69959.1| elongation factor E1 [Brassica oleracea var. capi...    76   8e-12
ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arab...    76   8e-12
ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|2...    76   8e-12
ref|XP_002302831.1| predicted protein [Populus trichocarpa] gi|2...    76   8e-12

>ref|XP_004136065.1| PREDICTED: elongation factor Tu, mitochondrial-like [Cucumis
           sativus] gi|449515049|ref|XP_004164562.1| PREDICTED:
           elongation factor Tu, mitochondrial-like [Cucumis
           sativus]
          Length = 450

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 45/95 (47%), Positives = 48/95 (50%)
 Frame = +2

Query: 365 KVLAEEGKVKALAFGEIDKAPAERQRRITILCVINCNAYMFCRSINFL*WC*YIVLEIYL 544
           KVLAEEGK KA+AF EIDKAP ER+R ITI                              
Sbjct: 86  KVLAEEGKAKAIAFDEIDKAPEERKRGITIAT---------------------------- 117

Query: 545 TF*NFMVLLQSHVEYETINRHYAHVDCAGHADYVK 649
                     +HVEYET  RHYAHVDC GHADYVK
Sbjct: 118 ----------AHVEYETAKRHYAHVDCPGHADYVK 142


>gb|AFL69959.1| elongation factor E1 [Brassica oleracea var. capitata]
          Length = 453

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 44/95 (46%), Positives = 48/95 (50%)
 Frame = +2

Query: 365 KVLAEEGKVKALAFGEIDKAPAERQRRITILCVINCNAYMFCRSINFL*WC*YIVLEIYL 544
           KVLAEEGK KA+AF EIDKAP E++R ITI                              
Sbjct: 89  KVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT---------------------------- 120

Query: 545 TF*NFMVLLQSHVEYETINRHYAHVDCAGHADYVK 649
                     +HVEYET  RHYAHVDC GHADYVK
Sbjct: 121 ----------AHVEYETAKRHYAHVDCPGHADYVK 145


>ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arabidopsis lyrata subsp.
           lyrata] gi|297318641|gb|EFH49063.1| hypothetical protein
           ARALYDRAFT_490266 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 44/95 (46%), Positives = 48/95 (50%)
 Frame = +2

Query: 365 KVLAEEGKVKALAFGEIDKAPAERQRRITILCVINCNAYMFCRSINFL*WC*YIVLEIYL 544
           KVLAEEGK KA+AF EIDKAP E++R ITI                              
Sbjct: 89  KVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT---------------------------- 120

Query: 545 TF*NFMVLLQSHVEYETINRHYAHVDCAGHADYVK 649
                     +HVEYET  RHYAHVDC GHADYVK
Sbjct: 121 ----------AHVEYETAKRHYAHVDCPGHADYVK 145


>ref|XP_002320388.1| predicted protein [Populus trichocarpa] gi|222861161|gb|EEE98703.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 44/95 (46%), Positives = 48/95 (50%)
 Frame = +2

Query: 365 KVLAEEGKVKALAFGEIDKAPAERQRRITILCVINCNAYMFCRSINFL*WC*YIVLEIYL 544
           KVLAEEGK KA+AF EIDKAP E++R ITI                              
Sbjct: 86  KVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT---------------------------- 117

Query: 545 TF*NFMVLLQSHVEYETINRHYAHVDCAGHADYVK 649
                     +HVEYET  RHYAHVDC GHADYVK
Sbjct: 118 ----------AHVEYETTKRHYAHVDCPGHADYVK 142


>ref|XP_002302831.1| predicted protein [Populus trichocarpa] gi|222844557|gb|EEE82104.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 44/95 (46%), Positives = 48/95 (50%)
 Frame = +2

Query: 365 KVLAEEGKVKALAFGEIDKAPAERQRRITILCVINCNAYMFCRSINFL*WC*YIVLEIYL 544
           KVLAEEGK KA+AF EIDKAP E++R ITI                              
Sbjct: 83  KVLAEEGKAKAIAFDEIDKAPEEKKRGITIAT---------------------------- 114

Query: 545 TF*NFMVLLQSHVEYETINRHYAHVDCAGHADYVK 649
                     +HVEYET  RHYAHVDC GHADYVK
Sbjct: 115 ----------AHVEYETAKRHYAHVDCPGHADYVK 139


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