BLASTX nr result

ID: Coptis21_contig00023693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023693
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thali...    94   2e-17
gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsi...    89   3e-16
gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thali...    88   8e-16
emb|CAN73622.1| hypothetical protein VITISV_042458 [Vitis vinifera]    87   2e-15
gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thali...    86   3e-15

>gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 781

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   LFNCDWANVGSGIKVEEGFTLVNL-HQSLTHKQDPFILASQAEPVFYSRESHDSSWYVVL 178
           +F C WA  G+G+KVE+GFTLVNL H  ++  +DPFILASQA+ VFYSR    SSWYV +
Sbjct: 37  IFRCQWAVRGNGVKVEDGFTLVNLNHSQVSFLKDPFILASQAKQVFYSRVDDSSSWYVAM 96

Query: 179 KAPSRGFRDFECSTEEDLSNVPAPPPFASVELVNDIEGDIEGEVYKRQDCEGTWV 343
           K  SR +   E + E +    P P          D++ +++   Y R DCEG +V
Sbjct: 97  KGSSRRYSK-EDAQEGNAEIGPLPADI-------DMDAEMDEAEYARSDCEGIYV 143


>gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsis thaliana]
          Length = 984

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   LFNCDWANVGSGIKVEEGFTLVNL-HQSLTHKQDPFILASQAEPVFYSRESHDSSWYVVL 178
           LF C+WA  G+G+K E+GFTLVNL H  ++  + P+ILASQA+ VFY RE   S WYV L
Sbjct: 190 LFRCNWAVKGNGVKQEDGFTLVNLNHSQVSFLRGPYILASQAKHVFYLREDGSSPWYVAL 249

Query: 179 KAPSRGFRDFECSTEEDLSNVPAPPPFASVELVNDIEGDIEGEVYKRQDCEGTWVLHKKK 358
           +  SR F   E    + ++ +   PP        DI+ D++    +R DCEG ++  +K+
Sbjct: 250 RGSSRRFSQKE--FVDSVAAIGTLPPNV------DIDADLDEAENERTDCEGIYMGQQKQ 301

Query: 359 K 361
           K
Sbjct: 302 K 302


>gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 531

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/114 (38%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   LFNCDWANVGSGIKVEEGFTLVNLHQS-LTHKQDPFILASQAEPVFYSRESHDSSWYVVL 178
           +F C WAN+G+G+K E+GFTLVNL+QS ++  +DP+ILASQA+ VFYSR    S+WYV +
Sbjct: 90  IFRCQWANIGNGVKEEDGFTLVNLNQSQVSFARDPYILASQAKQVFYSRADESSNWYVAM 149

Query: 179 KAPSRGFRDFECSTEEDLSNVPAPPPFASVELVNDIEGDIEGEVYKRQDCEGTW 340
           +  +R +     + + +  N    P    V++    +  ++ +   R DCEG +
Sbjct: 150 RGSTRRY----SAEDAESGNADVGPLPVLVDMDALADDLVDDDRNARADCEGIY 199


>emb|CAN73622.1| hypothetical protein VITISV_042458 [Vitis vinifera]
          Length = 559

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
 Frame = +2

Query: 2   LFNCDWANVGSGIKVEE-GFTLVNLHQSLTHKQDPFILASQAEPVFYSRESHDSSWYVVL 178
           +F CDW +  +GIKV+E GFTLV+  + + HK DPFILASQA+ VFY  +  D  W +VL
Sbjct: 416 IFKCDWVDNKNGIKVDELGFTLVDFSK-IGHKSDPFILASQAKQVFYVEDQLDPKWSIVL 474

Query: 179 KAPSRGFR------DFECSTEEDLSNVPAPPPFASVELVNDIEGDIEGEVYKRQDCEGTW 340
             P + F       DF  +  E    + + P   S +++++ E      +Y R+DCEG W
Sbjct: 475 SIPPKDFNNMEGLDDFTANCMEHHPFISSMPEVESFDVMDESEA-----IYMREDCEGIW 529

Query: 341 V 343
           +
Sbjct: 530 I 530


>gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 476

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   LFNCDWANVGSGIKVEEGFTLVNL-HQSLTHKQDPFILASQAEPVFYSRESHDSSWYVVL 178
           LF C+WA  G+ +K E+GFTLVNL H   +  +DP+ILASQA+ VFY RE   S WYV L
Sbjct: 87  LFRCNWAVKGNEVKQEDGFTLVNLNHSQDSFLRDPYILASQAKQVFYLREDDSSPWYVAL 146

Query: 179 KAPSRGFRDFECSTEEDLSNVPAPPPFASVELVNDIEGDIEGEVYKRQDCEGTWVLHKKK 358
           +  SR F   E    + ++ +   PP        DI+ D++    +R +C+G ++  +KK
Sbjct: 147 RGSSRRFSQKE--FVDSVAAIGTLPPNV------DIDADLDEAENERTNCKGIYMGQQKK 198

Query: 359 K 361
           K
Sbjct: 199 K 199


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