BLASTX nr result

ID: Coptis21_contig00023692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023692
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsi...   124   6e-27
gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thali...   112   2e-23
gb|AAG52024.1|AC022456_5 Tam1 transposon protein TNP2, putative;...   112   3e-23
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...   108   5e-22
gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thali...   107   1e-21

>gb|AAD28689.1| putative TNP1-like transposon protein [Arabidopsis thaliana]
          Length = 984

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/105 (57%), Positives = 76/105 (72%)
 Frame = +3

Query: 60  LDWLSDGPRCDAWSYKGYLINGYRFHIKDGEKGTQNSGVALSANSLCRASAKDTRQIEED 239
           L WL+ GPR  A +Y GY++NG RFH +  +K TQNSGV   A ++CR+SAKDT Q+ + 
Sbjct: 109 LKWLAYGPRSCARTYSGYIVNGQRFHTRTVDKKTQNSGVYYEATAICRSSAKDTSQVVDL 168

Query: 240 VTYYGVIKQIILLDYGVFQYPLFNCD*ANVGSGIKVEEGFTLVNL 374
           V+YYG I  IILLDY VF  PLF C+ A  G+G+K E+GFTLVNL
Sbjct: 169 VSYYGCITDIILLDYNVFYVPLFRCNWAVKGNGVKQEDGFTLVNL 213


>gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 531

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/103 (51%), Positives = 71/103 (68%)
 Frame = +3

Query: 66  WLSDGPRCDAWSYKGYLINGYRFHIKDGEKGTQNSGVALSANSLCRASAKDTRQIEEDVT 245
           WL+ GPR  A SY GY++NG RFH    ++ TQN G+   A ++C AS+KD   + + V+
Sbjct: 11  WLAYGPRLCARSYTGYIVNGNRFHTVSIDRQTQNCGMLHEATTMCIASSKDNTPMVDVVS 70

Query: 246 YYGVIKQIILLDYGVFQYPLFNCD*ANVGSGIKVEEGFTLVNL 374
           YYG +  IILLDY VF  P+F C  AN+G+G+K E+GFTLVNL
Sbjct: 71  YYGRVVDIILLDYNVFYIPIFRCQWANIGNGVKEEDGFTLVNL 113


>gb|AAG52024.1|AC022456_5 Tam1 transposon protein TNP2, putative; 12762-16371 [Arabidopsis
            thaliana]
          Length = 887

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/103 (47%), Positives = 73/103 (70%)
 Frame = +3

Query: 57   MLDWLSDGPRCDAWSYKGYLINGYRFHIKDGEKGTQNSGVALSANSLCRASAKDTRQIEE 236
            ++ W++ GPRC A S+ GY++NG+RFH    ++ +QNSG+   + ++CR+SAKD  Q+ +
Sbjct: 777  IIKWIAYGPRCSARSFTGYIVNGHRFHTSSLQRQSQNSGIYYESTAMCRSSAKDNSQVVD 836

Query: 237  DVTYYGVIKQIILLDYGVFQYPLFNCD*ANVGSGIKVEEGFTL 365
             V+YYG +  IILLDY VF  P+F C  A  G+ +KVE+GFTL
Sbjct: 837  LVSYYGRVIDIILLDYNVFYVPIFRCQWAVRGNRVKVEDGFTL 879


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/95 (53%), Positives = 67/95 (70%)
 Frame = +3

Query: 81  PRCDAWSYKGYLINGYRFHIKDGEKGTQNSGVALSANSLCRASAKDTRQIEEDVTYYGVI 260
           P  DA SY GY++NG RFH +  E+ +QNSGV   A ++CR+SAKDT Q+ + V+YY  +
Sbjct: 685 PYVDARSYTGYIVNGQRFHTRSLERESQNSGVYYEATTICRSSAKDTSQVVDLVSYYRTV 744

Query: 261 KQIILLDYGVFQYPLFNCD*ANVGSGIKVEEGFTL 365
             IILLDY VF  P+F C  A  G+G+KVE+GFTL
Sbjct: 745 TDIILLDYNVFYVPIFRCQWAVRGNGVKVEDGFTL 779


>gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 476

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/99 (53%), Positives = 68/99 (68%)
 Frame = +3

Query: 78  GPRCDAWSYKGYLINGYRFHIKDGEKGTQNSGVALSANSLCRASAKDTRQIEEDVTYYGV 257
           G R  A +Y  Y++NG RFH    +K TQNSGV   A ++CR+S KDT Q+ + V+YYG 
Sbjct: 12  GQRSCARTYSCYIVNGQRFHTITVDKKTQNSGVYYEATAICRSSGKDTSQVVDLVSYYGC 71

Query: 258 IKQIILLDYGVFQYPLFNCD*ANVGSGIKVEEGFTLVNL 374
           I  IILLDY VF +PLF C+ A  G+ +K E+GFTLVNL
Sbjct: 72  ITDIILLDYNVFYFPLFRCNWAVKGNEVKQEDGFTLVNL 110


Top