BLASTX nr result

ID: Coptis21_contig00023672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023672
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142440.1| PREDICTED: cytochrome c oxidase assembly fac...   103   2e-20
ref|XP_002263356.1| PREDICTED: cytochrome c oxidase assembly fac...   102   3e-20
ref|XP_002315392.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_003540490.1| PREDICTED: cytochrome c oxidase assembly fac...   100   1e-19
ref|XP_002264124.1| PREDICTED: cytochrome c oxidase assembly fac...   100   1e-19

>ref|XP_004142440.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Cucumis
           sativus] gi|449487146|ref|XP_004157510.1| PREDICTED:
           cytochrome c oxidase assembly factor 5-like [Cucumis
           sativus]
          Length = 71

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/52 (86%), Positives = 50/52 (96%)
 Frame = -1

Query: 548 DCVKVENKSYRECAGEKTPSISTECVGLRETYFNCKRGQVDMRARIRGNKGY 393
           DCVKV+N++YRECAGEK+P I +ECVGLRETYFNCKRGQVDMRARIRGNKGY
Sbjct: 20  DCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY 71


>ref|XP_002263356.1| PREDICTED: cytochrome c oxidase assembly factor 5 [Vitis vinifera]
           gi|298204693|emb|CBI25191.3| unnamed protein product
           [Vitis vinifera]
          Length = 71

 Score =  102 bits (255), Expect = 3e-20
 Identities = 45/52 (86%), Positives = 50/52 (96%)
 Frame = -1

Query: 548 DCVKVENKSYRECAGEKTPSISTECVGLRETYFNCKRGQVDMRARIRGNKGY 393
           DCVKVE +S++EC GEK+PSIS+ECVGLRETYFNCKRGQVDMRARIRGNKGY
Sbjct: 20  DCVKVEKRSFKECCGEKSPSISSECVGLRETYFNCKRGQVDMRARIRGNKGY 71


>ref|XP_002315392.1| predicted protein [Populus trichocarpa] gi|222864432|gb|EEF01563.1|
           predicted protein [Populus trichocarpa]
          Length = 71

 Score =  100 bits (250), Expect = 1e-19
 Identities = 43/52 (82%), Positives = 50/52 (96%)
 Frame = -1

Query: 548 DCVKVENKSYRECAGEKTPSISTECVGLRETYFNCKRGQVDMRARIRGNKGY 393
           DC+K+E++ Y+ECAGEK+PSI +ECVGLRETYFNCKRGQVDMRARIRGNKGY
Sbjct: 20  DCIKMEDRPYKECAGEKSPSIPSECVGLRETYFNCKRGQVDMRARIRGNKGY 71


>ref|XP_003540490.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Glycine
           max]
          Length = 71

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -1

Query: 548 DCVKVENKSYRECAGEKTPSISTECVGLRETYFNCKRGQVDMRARIRGNKGY 393
           DCVKVE +SY+EC GEK+P I +ECVGLRETYFNCKRGQVDMRARIRGNKGY
Sbjct: 20  DCVKVEKRSYKECVGEKSPCIPSECVGLRETYFNCKRGQVDMRARIRGNKGY 71


>ref|XP_002264124.1| PREDICTED: cytochrome c oxidase assembly factor 5 [Vitis vinifera]
           gi|298204681|emb|CBI25179.3| unnamed protein product
           [Vitis vinifera]
          Length = 71

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -1

Query: 548 DCVKVENKSYRECAGEKTPSISTECVGLRETYFNCKRGQVDMRARIRGNKGY 393
           DCVKVE +S++EC GEK+P IS+ECVGLRETYFNCKRGQVDMRARIRGNKGY
Sbjct: 20  DCVKVEKRSFKECCGEKSPLISSECVGLRETYFNCKRGQVDMRARIRGNKGY 71


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