BLASTX nr result
ID: Coptis21_contig00023670
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023670 (473 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_565149.2| PsbP domain-containing protein 4 [Arabidopsis t... 274 6e-72 ref|XP_002889122.1| thylakoid lumenal 29.8 kDa protein [Arabidop... 271 3e-71 ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,... 268 3e-70 ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|2... 263 1e-68 ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloropl... 261 5e-68 >ref|NP_565149.2| PsbP domain-containing protein 4 [Arabidopsis thaliana] gi|190358910|sp|O49292.2|PPD4_ARATH RecName: Full=PsbP domain-containing protein 4, chloroplastic; AltName: Full=OEC23-like protein 5; Flags: Precursor gi|332197812|gb|AEE35933.1| PsbP domain-containing protein 4 [Arabidopsis thaliana] Length = 260 Score = 274 bits (700), Expect = 6e-72 Identities = 128/154 (83%), Positives = 145/154 (94%) Frame = +2 Query: 2 AVLKQGLLAGRIPGLSEPDKQGWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVS 181 AV+KQGLLAGR+PGLSEPD++GWRTYRRPDEKSGGHGVGWSPIIPY+FSVPQ W EVPVS Sbjct: 71 AVVKQGLLAGRVPGLSEPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVS 130 Query: 182 IADLGGTEIDLRFASSQEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIG 361 IADLGGTEIDLRFAS +EGRLSV+VAPVLRFADNLG+DVKI+NIG P KVI+AFGPEVIG Sbjct: 131 IADLGGTEIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIG 190 Query: 362 ENVDGRVLSTEVMEYDGRMYYHYELEPPHYLISA 463 ENV+G+VLS+ V E+DGR+YY +ELEPPH LI+A Sbjct: 191 ENVEGKVLSSNVAEHDGRLYYQFELEPPHVLITA 224 >ref|XP_002889122.1| thylakoid lumenal 29.8 kDa protein [Arabidopsis lyrata subsp. lyrata] gi|297334963|gb|EFH65381.1| thylakoid lumenal 29.8 kDa protein [Arabidopsis lyrata subsp. lyrata] Length = 256 Score = 271 bits (694), Expect = 3e-71 Identities = 127/154 (82%), Positives = 144/154 (93%) Frame = +2 Query: 2 AVLKQGLLAGRIPGLSEPDKQGWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVS 181 AV+KQGLLAGR+PGLSEPD +GWRTYRRPDEKSGGHGVGWSPIIPY+FSVPQ W EVPVS Sbjct: 67 AVVKQGLLAGRVPGLSEPDDEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVS 126 Query: 182 IADLGGTEIDLRFASSQEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIG 361 IADLGGTEIDLRFAS +EGRLSV+VAPVLRFADNLG+DVKI+NIG P KVI+AFGPEVIG Sbjct: 127 IADLGGTEIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGPPAKVINAFGPEVIG 186 Query: 362 ENVDGRVLSTEVMEYDGRMYYHYELEPPHYLISA 463 ENV+G+VLS+ V E++GR+YY +ELEPPH LI+A Sbjct: 187 ENVEGKVLSSNVAEHEGRLYYQFELEPPHVLITA 220 >ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis vinifera] gi|302142754|emb|CBI19957.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 268 bits (685), Expect = 3e-70 Identities = 125/154 (81%), Positives = 142/154 (92%) Frame = +2 Query: 2 AVLKQGLLAGRIPGLSEPDKQGWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVS 181 AV+KQGLLAGR+PGLSEPD+QGWRTYRRPDEKSGGHGVGWSPIIPY FSVP GWEEVPVS Sbjct: 90 AVVKQGLLAGRVPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYIFSVPSGWEEVPVS 149 Query: 182 IADLGGTEIDLRFASSQEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIG 361 IADLGGTEIDLRFA+S+EGRL V+VAPVLRFADNLG+D K++ IG P+KVI+AFGPEVIG Sbjct: 150 IADLGGTEIDLRFANSKEGRLFVIVAPVLRFADNLGDDAKVEKIGPPEKVIAAFGPEVIG 209 Query: 362 ENVDGRVLSTEVMEYDGRMYYHYELEPPHYLISA 463 ENV+G+VLS V+E+ GR YY +ELEPPH LI+A Sbjct: 210 ENVEGKVLSMGVVEHSGRTYYQFELEPPHVLITA 243 >ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|222842669|gb|EEE80216.1| predicted protein [Populus trichocarpa] Length = 276 Score = 263 bits (672), Expect = 1e-68 Identities = 126/154 (81%), Positives = 138/154 (89%) Frame = +2 Query: 2 AVLKQGLLAGRIPGLSEPDKQGWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVS 181 AV+KQGLLAGRIPGLSEPD QGWRTYRRPD+KSGGHGVGWSPIIPY FSVPQGWEEVPVS Sbjct: 87 AVVKQGLLAGRIPGLSEPDDQGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQGWEEVPVS 146 Query: 182 IADLGGTEIDLRFASSQEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIG 361 IADLGGTEIDLRF SS+EGRL V+VAPVLRFAD LGE+ I+ IG P+KVI+AFGPEVIG Sbjct: 147 IADLGGTEIDLRFGSSKEGRLFVIVAPVLRFADYLGENATIEQIGPPEKVINAFGPEVIG 206 Query: 362 ENVDGRVLSTEVMEYDGRMYYHYELEPPHYLISA 463 ENV+G+VLS V E+ GR YY YELEPPH LI+A Sbjct: 207 ENVEGKVLSMNVEEHSGRRYYQYELEPPHALITA 240 >ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative [Ricinus communis] gi|223534553|gb|EEF36252.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative [Ricinus communis] Length = 270 Score = 261 bits (666), Expect = 5e-68 Identities = 122/154 (79%), Positives = 140/154 (90%) Frame = +2 Query: 2 AVLKQGLLAGRIPGLSEPDKQGWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQGWEEVPVS 181 A +KQGLLAGRIPGLSEPD+QGWRTYRRPD+KSGGHGVGWSPIIPY+F VPQ WEEVPVS Sbjct: 81 AAVKQGLLAGRIPGLSEPDEQGWRTYRRPDDKSGGHGVGWSPIIPYAFKVPQEWEEVPVS 140 Query: 182 IADLGGTEIDLRFASSQEGRLSVVVAPVLRFADNLGEDVKIQNIGTPDKVISAFGPEVIG 361 IADLGGTEIDLRF+SS+EGRL V+VAPVLRFAD+LG++ I+ IG P+KVI+AFGPEVIG Sbjct: 141 IADLGGTEIDLRFSSSKEGRLFVIVAPVLRFADDLGDNATIERIGPPEKVINAFGPEVIG 200 Query: 362 ENVDGRVLSTEVMEYDGRMYYHYELEPPHYLISA 463 ENV+G+VLS V E+ GRMYY +ELEPPH LI+A Sbjct: 201 ENVEGKVLSMNVAEHSGRMYYQFELEPPHVLITA 234