BLASTX nr result

ID: Coptis21_contig00023669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023669
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275599.1| PREDICTED: uncharacterized protein LOC100264...    62   6e-08
ref|XP_002320311.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002302757.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002275599.1| PREDICTED: uncharacterized protein LOC100264117 [Vitis vinifera]
           gi|297743964|emb|CBI36934.3| unnamed protein product
           [Vitis vinifera]
          Length = 558

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -2

Query: 113 ISSPPLVGGGEKKHWWITNKKIVDKYVKEARALIAT 6
           +++ P V GGEKKHWW+ NKKIVDKYVK+AR LIAT
Sbjct: 1   MATSPSVAGGEKKHWWLRNKKIVDKYVKDARCLIAT 36


>ref|XP_002320311.1| predicted protein [Populus trichocarpa] gi|222861084|gb|EEE98626.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = -2

Query: 119 MAISSPPLVGGGEKKHWWITNKKIVDKYVKEARALIAT 6
           M  S+ P + G EKKHWW++N+KIVDKY+K+AR LIA+
Sbjct: 1   MTTSTSPCLSGNEKKHWWLSNRKIVDKYIKDARNLIAS 38


>ref|XP_002302757.1| predicted protein [Populus trichocarpa] gi|222844483|gb|EEE82030.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = -2

Query: 119 MAISSPPLVGGGEKKHWWITNKKIVDKYVKEARALIAT 6
           MA S+ P +   EKKHWW++N+KIVDKY+K+AR LIA+
Sbjct: 1   MAASTSPCLSMNEKKHWWLSNRKIVDKYIKDARNLIAS 38


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