BLASTX nr result

ID: Coptis21_contig00023665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023665
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    57   3e-06

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
 Frame = +1

Query: 22   LGNFRFLGTSSDVNRGKGPREAFIVERDNTSSNIELRLGQPSQQSYNVEGSVVSTLQPQP 201
            L N R LG  SD++R    RE  I+ERD  SSNIELRLGQP QQS     SV+  + P+ 
Sbjct: 484  LPNERTLGKDSDISRHNNSREGVILERDAVSSNIELRLGQPCQQSRTSRNSVLPVMGPRI 543

Query: 202  LSTLQAQPFVMYSNSPKSLLQDPVFHNVGSPMLKEESRQNLGGLLPSNTSISHRGIQSKS 381
            L TL       +       + D  F+   +  + EE RQ L     ++ S + R     +
Sbjct: 544  LDTLGDPQKSFFPEQLIHNILDFFFYAAANSNVMEECRQYLQCATGTSNSSARREQIPFN 603

Query: 382  NVWHL----APRDSAKVEKLKGDMVKRS--HTYLPQFSTLPERDVLSQTSKNRINYSETF 543
             V H        D+AK+E+ +GD  K S     L   +T  E ++ S+   N +N +  F
Sbjct: 604  CVNHTFEINNALDAAKLEQFRGDAAKSSVISMLLSHLTTPTEGNMQSKAINNVVNDNGHF 663

Query: 544  MFSAPH 561
            +  + H
Sbjct: 664  VPRSLH 669


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
           gi|223540952|gb|EEF42510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 903

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 55/166 (33%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
 Frame = +1

Query: 10  ANQNLGNFRFLGTSSDVNRGKGPREAFIVERDNTSSNIELRLGQPSQQSYNVEGSVVSTL 189
           A+  L N R L  SSDV RGK  ++   +E+D + S+IEL+LGQP Q   +    V+  +
Sbjct: 458 AHPALQNCRALVKSSDVGRGKDAQDGATMEKDGSPSSIELKLGQPYQHGQSPGNPVLPVI 517

Query: 190 QPQPLSTLQAQPFVMYSNSPKSLLQDPVFHNVGSPMLKEESRQNLGGLLPSNTSISHRGI 369
            PQ  +TL         +  K   Q+ + +NV S   +EESR+     LP    +S   I
Sbjct: 518 GPQFYNTL--------VSPHKPFSQEQLINNV-SCQGEEESRR----CLPHAAHLSDSTI 564

Query: 370 QSK------SNVWHLAPRDSAKVEKLKGDMVKRSHTYLPQFSTLPE 489
           + K       N  +    DS ++EKL  +M K S   L +   LPE
Sbjct: 565 RRKQDHLRYGNSGNDRTVDSTELEKL--NMAKPSVVSLFKHYALPE 608


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