BLASTX nr result

ID: Coptis21_contig00023657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023657
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30860.3| unnamed protein product [Vitis vinifera]              119   4e-25
ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   119   4e-25
ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   108   6e-22
ref|XP_003547209.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   107   2e-21
ref|XP_003541661.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   105   7e-21

>emb|CBI30860.3| unnamed protein product [Vitis vinifera]
          Length = 689

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/122 (47%), Positives = 82/122 (67%)
 Frame = -2

Query: 366 YADSEGIIGGNSYIMSSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGML 187
           + D+EGI G  + + SS  E+SD ++++NP+ D+DL ++NER  SS+ AL + AHRF M+
Sbjct: 92  WGDNEGIAG--NMLPSSDSEDSDGEIIINPVSDIDLATSNERLVSSNDALTMAAHRFAMI 149

Query: 186 RRRGKTNRIQHGNIINAGXXXXXXXXXXXVDWCSWRIVRLPLAPFYLSRPFLVSAVLASL 7
            +  K NRI++G ++NAG           VD C+WRIVRLPL PFYL+RPF +S VL S 
Sbjct: 150 GKGRKKNRIKYGILVNAGLITFLTMLLLLVDSCAWRIVRLPLEPFYLTRPFFISTVLVSG 209

Query: 6   AG 1
            G
Sbjct: 210 VG 211


>ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Vitis vinifera]
          Length = 545

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/122 (47%), Positives = 82/122 (67%)
 Frame = -2

Query: 366 YADSEGIIGGNSYIMSSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGML 187
           + D+EGI G  + + SS  E+SD ++++NP+ D+DL ++NER  SS+ AL + AHRF M+
Sbjct: 115 WGDNEGIAG--NMLPSSDSEDSDGEIIINPVSDIDLATSNERLVSSNDALTMAAHRFAMI 172

Query: 186 RRRGKTNRIQHGNIINAGXXXXXXXXXXXVDWCSWRIVRLPLAPFYLSRPFLVSAVLASL 7
            +  K NRI++G ++NAG           VD C+WRIVRLPL PFYL+RPF +S VL S 
Sbjct: 173 GKGRKKNRIKYGILVNAGLITFLTMLLLLVDSCAWRIVRLPLEPFYLTRPFFISTVLVSG 232

Query: 6   AG 1
            G
Sbjct: 233 VG 234


>ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
           gi|449527335|ref|XP_004170667.1| PREDICTED:
           phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
          Length = 521

 Score =  108 bits (271), Expect = 6e-22
 Identities = 67/166 (40%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
 Frame = -2

Query: 492 AYY--NLKFPGLHFRRRKRYNFVPIKATMGEXXXXXXXXXXXXDYADSEGIIGGNSYIMS 319
           +YY  NL+ P +H  RR R   V  +    +             ++D+EG  G    + S
Sbjct: 49  SYYDVNLRVPKVHKTRRHRTCSVT-EVRAFDQDSFDFDIPSLDHFSDNEGT-GTGFGLPS 106

Query: 318 SSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRIQHGNIIN 139
           S GE+SD +++LNP+ DVDLP+ + +      AL VTAHR  ML R     RI+HG   N
Sbjct: 107 SDGEDSDPEIILNPVSDVDLPAVSVQHND---ALTVTAHRMAMLSRGRHKYRIRHGLFTN 163

Query: 138 AGXXXXXXXXXXXVDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAG 1
            G           VDWC+WR VRLPL PF+++ PFL SA LAS AG
Sbjct: 164 TGLIAFLMILLLYVDWCAWRTVRLPLGPFHMTGPFLTSACLASCAG 209


>ref|XP_003547209.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Glycine max]
          Length = 510

 Score =  107 bits (267), Expect = 2e-21
 Identities = 55/109 (50%), Positives = 71/109 (65%)
 Frame = -2

Query: 327 IMSSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRIQHGN 148
           + SS GE+SD ++ L P+ D+DLPS +    S++ AL V AHRF  L R  K +R + G 
Sbjct: 94  LSSSDGEDSDGEIFLTPVNDLDLPSVSA---SNNDALTVAAHRFANLGRGRKKSRTKLGI 150

Query: 147 IINAGXXXXXXXXXXXVDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAG 1
            I  G           VDWC+WRIVRLPL+PFYL+RPFL+SA+LAS AG
Sbjct: 151 FITLGLIIVLTLLLLYVDWCAWRIVRLPLSPFYLTRPFLISAILASFAG 199


>ref|XP_003541661.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Glycine max]
          Length = 562

 Score =  105 bits (262), Expect = 7e-21
 Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
 Frame = -2

Query: 336 NSYIMSSS-GEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRI 160
           ++Y++SSS GE+SD ++ L P+ D+DLPS +    S++ AL V AHRF  L R  K +R 
Sbjct: 142 SAYMLSSSDGEDSDGEIFLTPVNDLDLPSVSA---SNNDALTVAAHRFANLGRGRKKSRT 198

Query: 159 QHGNIINAGXXXXXXXXXXXVDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAG 1
           + G  I  G           VDWC+WRIVRLPL+PFYL+RPFL+SA+L S  G
Sbjct: 199 KLGIFITMGLIIVLTLLLLYVDWCAWRIVRLPLSPFYLTRPFLISAILVSFVG 251


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