BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023647
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    87   2e-15
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    87   3e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    85   7e-15
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    84   1e-14
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 56/131 (42%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
 Frame = +3

Query: 72  EYLVELCGDLLQIVRDLEFGDDFRAG-----YVTVGFTVFKLDHLGANWIEVKSLGGRIL 236
           +YLVE   +LL + R L+   D         Y T  F V +LD     W  V SLG R L
Sbjct: 254 QYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRAL 313

Query: 237 FLGDNSSLSLSVSDMPGCKPNGIYFTDDMHCGFYNDLYGIHPHDMGVFSMEDRSIELHYP 416
           FLG+N SLSLS  D PGCK N IY+TDD     Y+ + G    D+G+F++ED SIE    
Sbjct: 314 FLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGG--EQDLGIFNLEDGSIEPLPC 371

Query: 417 MEFK*SFPHPL 449
             F+  +P PL
Sbjct: 372 SHFRIRWPPPL 382


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 56/131 (42%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
 Frame = +3

Query: 72  EYLVELCGDLLQIVRDLEFGDDFRAG-----YVTVGFTVFKLDHLGANWIEVKSLGGRIL 236
           +YLVE   +LL + R L+   D         Y T  F V +LD     W  V SLG R L
Sbjct: 254 QYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRAL 313

Query: 237 FLGDNSSLSLSVSDMPGCKPNGIYFTDDMHCGFYNDLYGIHPHDMGVFSMEDRSIELHYP 416
           FLG+N SLSLS  D PGCK N IY+TDD     Y+ + G    D+G+F++ED SIE    
Sbjct: 314 FLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGG--EQDLGIFNLEDGSIEPLPC 371

Query: 417 MEFK*SFPHPL 449
             F+  +P PL
Sbjct: 372 SHFRIRWPPPL 382


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 49/118 (41%), Positives = 69/118 (58%), Gaps = 7/118 (5%)
 Frame = +3

Query: 72  EYLVELCGDLLQIVR--DLEFGDDF-----RAGYVTVGFTVFKLDHLGANWIEVKSLGGR 230
           +YLV    +LL + R  DLE+  D         Y T+ F VF+LD  G  W+ + +LG +
Sbjct: 257 QYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDK 316

Query: 231 ILFLGDNSSLSLSVSDMPGCKPNGIYFTDDMHCGFYNDLYGIHPHDMGVFSMEDRSIE 404
            LF+G+NSSLSLS +D  GC  N IY+TDD     Y+  +G   HD+G+F + D +IE
Sbjct: 317 ALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFG--DHDLGIFKLCDETIE 372


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
 Frame = +3

Query: 75  YLVELCGDLLQIVRDLEFGDDFRAG------YVTVGFTVFKLDHLGANWIEVKSLGGRIL 236
           Y V   GD+L ++R L+      AG      Y TVGF VFK++     W  V++LG R+L
Sbjct: 254 YAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVL 313

Query: 237 FLGDNSSLSLSVSDMPGCKPNGIYFTDDMHCGFYNDLYGIHPHDMGVFSMEDRSIE 404
           F+G NSSLS   SD  GC  + IYFTDD      +D  G   HD+GVF + D+SIE
Sbjct: 314 FVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDACG--KHDLGVFRLRDKSIE 367


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +3

Query: 72  EYLVELCGDLLQIVRDLEFGDDFRAG-YVTVGFTVFKLDHLGANWIEVKSLGGRILFLGD 248
           +YLV     LL + R L+   +F    Y T  F VFKLD  G  W  V SLG  +LF+G+
Sbjct: 258 QYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGE 317

Query: 249 NSSLSLSVSDMPGCKPNGIYFTDDMHCGFYNDLYGIHPHDMGVFSMEDRSIE 404
           NSSL+LS S + GC  + IY+TDD     Y+   G   HD+G+F + D SIE
Sbjct: 318 NSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIG--EHDLGIFKLSDGSIE 367