BLASTX nr result

ID: Coptis21_contig00023637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023637
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20867.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002281412.1| PREDICTED: probable peptide transporter At1g...    87   1e-15
ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002281400.2| PREDICTED: probable peptide transporter At1g...    82   6e-14
ref|XP_002516008.1| nitrate transporter, putative [Ricinus commu...    81   1e-13

>emb|CBI20867.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/87 (47%), Positives = 61/87 (70%)
 Frame = -3

Query: 263  TGIMIFTTLGQFSITVLQANCMDRHITSSFQISSGSFGLFVAIAATLALVFYGQVVIHLV 84
            TGIMI  ++ Q S + LQAN MDRHIT +F+I +G+F +F  I  T+ L  Y  +++ ++
Sbjct: 931  TGIMILMSMEQTSFSTLQANTMDRHITPNFEIPAGTFSVFTIITLTIWLPVYDCLLVPIL 990

Query: 83   TKYRQQPRGVRPTLRMGIGLLISCLAM 3
             +Y  Q RG+ P +RMGIGL++SC+AM
Sbjct: 991  ARYTGQLRGLSPKVRMGIGLVLSCMAM 1017



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/87 (43%), Positives = 58/87 (66%)
 Frame = -3

Query: 263 TGIMIFTTLGQFSITVLQANCMDRHITSSFQISSGSFGLFVAIAATLALVFYGQVVIHLV 84
           TGIMI  ++GQ S T LQAN MDR++T +F+I + SF +   +  T+ +  Y  V++ ++
Sbjct: 340 TGIMILVSMGQTSFTTLQANTMDRYLTPNFKIPAASFAVSTVVVLTIWIPIYDIVLVPIL 399

Query: 83  TKYRQQPRGVRPTLRMGIGLLISCLAM 3
            +Y   PRG+    RMGIGL++SC+AM
Sbjct: 400 ARYTGCPRGLSMKFRMGIGLVLSCVAM 426


>ref|XP_002281412.1| PREDICTED: probable peptide transporter At1g52190 [Vitis vinifera]
          Length = 592

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/87 (47%), Positives = 61/87 (70%)
 Frame = -3

Query: 263 TGIMIFTTLGQFSITVLQANCMDRHITSSFQISSGSFGLFVAIAATLALVFYGQVVIHLV 84
           TGIMI  ++ Q S + LQAN MDRHIT +F+I +G+F +F  I  T+ L  Y  +++ ++
Sbjct: 342 TGIMILMSMEQTSFSTLQANTMDRHITPNFEIPAGTFSVFTIITLTIWLPVYDCLLVPIL 401

Query: 83  TKYRQQPRGVRPTLRMGIGLLISCLAM 3
            +Y  Q RG+ P +RMGIGL++SC+AM
Sbjct: 402 ARYTGQLRGLSPKVRMGIGLVLSCMAM 428


>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/87 (45%), Positives = 59/87 (67%)
 Frame = -3

Query: 263 TGIMIFTTLGQFSITVLQANCMDRHITSSFQISSGSFGLFVAIAATLALVFYGQVVIHLV 84
           TGIMI   + Q +  +LQA+ MDRHI+SSFQI +GSFG+F  I+    ++ Y + ++ L 
Sbjct: 223 TGIMISINISQSTFQLLQASSMDRHISSSFQIPAGSFGMFTIISLATWVILYDRAILPLA 282

Query: 83  TKYRQQPRGVRPTLRMGIGLLISCLAM 3
           +K + +P  +   LRMGIGL +SC+AM
Sbjct: 283 SKIKGKPVQLGAKLRMGIGLFLSCMAM 309


>ref|XP_002281400.2| PREDICTED: probable peptide transporter At1g52190-like [Vitis
           vinifera]
          Length = 583

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/87 (43%), Positives = 58/87 (66%)
 Frame = -3

Query: 263 TGIMIFTTLGQFSITVLQANCMDRHITSSFQISSGSFGLFVAIAATLALVFYGQVVIHLV 84
           TGIMI  ++GQ S T LQAN MDR++T +F+I + SF +   +  T+ +  Y  V++ ++
Sbjct: 334 TGIMILVSMGQTSFTTLQANTMDRYLTPNFKIPAASFAVSTVVVLTIWIPIYDIVLVPIL 393

Query: 83  TKYRQQPRGVRPTLRMGIGLLISCLAM 3
            +Y   PRG+    RMGIGL++SC+AM
Sbjct: 394 ARYTGCPRGLSMKFRMGIGLVLSCVAM 420


>ref|XP_002516008.1| nitrate transporter, putative [Ricinus communis]
           gi|223544913|gb|EEF46428.1| nitrate transporter,
           putative [Ricinus communis]
          Length = 612

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/87 (44%), Positives = 57/87 (65%)
 Frame = -3

Query: 263 TGIMIFTTLGQFSITVLQANCMDRHITSSFQISSGSFGLFVAIAATLALVFYGQVVIHLV 84
           TGIM+   + Q S  VLQA+ MDRH++S FQ+ +GSF  FV I+  + +V Y + ++ L 
Sbjct: 344 TGIMMSINVSQGSFQVLQASSMDRHLSSKFQVPAGSFATFVVISMAIWIVLYDRAILPLA 403

Query: 83  TKYRQQPRGVRPTLRMGIGLLISCLAM 3
           TK + +P  +   LRMGIGL +SC+ M
Sbjct: 404 TKIKGKPVRLGVKLRMGIGLFLSCMGM 430


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