BLASTX nr result

ID: Coptis21_contig00023629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023629
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TA...   218   1e-54
emb|CBI40096.3| unnamed protein product [Vitis vinifera]              217   2e-54
ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase...   213   3e-53
ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group] g...   206   3e-51
ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase...   206   4e-51

>ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis] gi|223529101|gb|EEF31082.1| tRNA-specific
           adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score =  218 bits (554), Expect = 1e-54
 Identities = 108/175 (61%), Positives = 125/175 (71%)
 Frame = -3

Query: 526 SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXXXXEMEAID 347
           S+ T A+ME A++QA+ ALD+ EVP+GCV VED KVIASG              EMEAID
Sbjct: 40  SSETFAYMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAID 99

Query: 346 GLLKNWQENGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCANDRFGGCG 167
            LL+ WQ+ GLS  E+  KFS+C LYVTCEPCIMCA+ALSI+GI  VYYGCAND+FGGCG
Sbjct: 100 VLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCG 159

Query: 166 XXXXXXXXXXXXXXXXXXSQGKGFKCTGGIMAAEAISLLRSFYEQGNPNAPKPHR 2
                             +QGKGFKCTGGIMA+EA+SLLR FYEQGNPNAPKPHR
Sbjct: 160 SILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAPKPHR 214


>emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  217 bits (552), Expect = 2e-54
 Identities = 111/183 (60%), Positives = 129/183 (70%)
 Frame = -3

Query: 550 MASCEEEDSAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXX 371
           MAS  EE+   TLAFME A+QQAKLALD+ EVP+GCV VED K+IA+G            
Sbjct: 16  MASLGEENLPGTLAFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETRNATR 75

Query: 370 XXEMEAIDGLLKNWQENGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCA 191
             EMEAID LL+ WQ+NGLS +E+   FS+C LYVTCEPCIMCA++LSI+GI+ VYYGCA
Sbjct: 76  HAEMEAIDVLLEQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYGCA 135

Query: 190 NDRFGGCGXXXXXXXXXXXXXXXXXXSQGKGFKCTGGIMAAEAISLLRSFYEQGNPNAPK 11
           ND+FGGCG                     KGFKCTGGIMA EA+SLL+ FYEQGNPNAPK
Sbjct: 136 NDKFGGCGSILSLHSSSSKLLTSGTPLV-KGFKCTGGIMATEAVSLLQRFYEQGNPNAPK 194

Query: 10  PHR 2
           PHR
Sbjct: 195 PHR 197


>ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Cucumis
           sativus]
          Length = 191

 Score =  213 bits (542), Expect = 3e-53
 Identities = 110/183 (60%), Positives = 126/183 (68%)
 Frame = -3

Query: 550 MASCEEEDSAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXX 371
           M S  E+ S+ TL FME A+QQAKLAL+N EVP+GCV VED  VIA+G            
Sbjct: 1   MDSSVEDCSSDTLRFMELAIQQAKLALNNLEVPVGCVIVEDGMVIATGRNRTTETRNATR 60

Query: 370 XXEMEAIDGLLKNWQENGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCA 191
             EMEAID L++ WQ +GLS  E+  KFS+C LYVTCEPCIMCASALSIIGI+ VYYGCA
Sbjct: 61  HAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSIIGIKEVYYGCA 120

Query: 190 NDRFGGCGXXXXXXXXXXXXXXXXXXSQGKGFKCTGGIMAAEAISLLRSFYEQGNPNAPK 11
           ND+FGGCG                    G+GFKCT GIMA+EA+ L RSFYEQGNPNAPK
Sbjct: 121 NDKFGGCGSILSLHLGSGEAPTSGNGL-GRGFKCTAGIMASEAVGLFRSFYEQGNPNAPK 179

Query: 10  PHR 2
           PHR
Sbjct: 180 PHR 182


>ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group]
           gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate
           deaminase zinc-binding region family protein, expressed
           [Oryza sativa Japonica Group]
           gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa
           Japonica Group] gi|218192723|gb|EEC75150.1| hypothetical
           protein OsI_11352 [Oryza sativa Indica Group]
          Length = 183

 Score =  206 bits (525), Expect = 3e-51
 Identities = 102/175 (58%), Positives = 118/175 (67%)
 Frame = -3

Query: 526 SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXXXXEMEAID 347
           +A    FME A++QAK ALDN EVP+GCV VED KVI+SG              EMEAID
Sbjct: 2   AAAAAEFMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAID 61

Query: 346 GLLKNWQENGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCANDRFGGCG 167
            LL+ WQ  GL   ++  KF+RCDLYVTCEPCIMCA ALSI+GIR VY+GCAND+FGGCG
Sbjct: 62  ILLREWQGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCG 121

Query: 166 XXXXXXXXXXXXXXXXXXSQGKGFKCTGGIMAAEAISLLRSFYEQGNPNAPKPHR 2
                                KG+KCTGGIMA EA++L R+FYEQGNPNAPKPHR
Sbjct: 122 SIMSLHQSSSAELSGEEIPGPKGYKCTGGIMAEEAVALFRNFYEQGNPNAPKPHR 176


>ref|XP_003543068.1| PREDICTED: tRNA-specific adenosine deaminase 2 [Glycine max]
          Length = 182

 Score =  206 bits (524), Expect = 4e-51
 Identities = 107/175 (61%), Positives = 121/175 (69%)
 Frame = -3

Query: 526 SAVTLAFMEFAMQQAKLALDNQEVPIGCVFVEDEKVIASGXXXXXXXXXXXXXXEMEAID 347
           S+ TLAFME A+QQAKLALD  EVP+GCV VED KVIASG              EMEAID
Sbjct: 3   SSETLAFMELAIQQAKLALDVLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAID 62

Query: 346 GLLKNWQENGLSAIEIEGKFSRCDLYVTCEPCIMCASALSIIGIRAVYYGCANDRFGGCG 167
            LL  WQ++GLS  E+  KFS C LYVTCEPCIMCASALSI+GI+ V+YGC+ND+FGGCG
Sbjct: 63  VLLGQWQKHGLSMSEVAEKFSNCSLYVTCEPCIMCASALSILGIKEVFYGCSNDKFGGCG 122

Query: 166 XXXXXXXXXXXXXXXXXXSQGKGFKCTGGIMAAEAISLLRSFYEQGNPNAPKPHR 2
                               GK FKCTG IMA+EA+ L R+FYEQGNPNAPKPHR
Sbjct: 123 -SILSLHLSNTAPLNNEVPSGKCFKCTGRIMASEAVLLFRTFYEQGNPNAPKPHR 176


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