BLASTX nr result
ID: Coptis21_contig00023625
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023625 (767 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protei... 187 2e-45 ref|XP_002324647.1| predicted protein [Populus trichocarpa] gi|2... 178 1e-42 gb|AFK39859.1| unknown [Medicago truncatula] 178 1e-42 ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago... 178 1e-42 ref|XP_004139301.1| PREDICTED: thylakoid lumenal 16.5 kDa protei... 175 8e-42 >ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic isoform 1 [Vitis vinifera] gi|297738978|emb|CBI28223.3| unnamed protein product [Vitis vinifera] Length = 234 Score = 187 bits (476), Expect = 2e-45 Identities = 111/205 (54%), Positives = 130/205 (63%), Gaps = 1/205 (0%) Frame = +2 Query: 95 YPHTCSNVKRHNSLTVTNGIATTESSRLIICPIITKRNLITNFTTIFTLSLAGKGFFXXX 274 YPH NVKR LT++ ++ S PIITKR+L T SLAGKG++ Sbjct: 37 YPHR-HNVKRQ--LTLSKAVSEPRPSS----PIITKRSLSITLLTSLVFSLAGKGYYSDA 89 Query: 275 XXXXXXXXXXXXXXXXXXXXXXM-IERQAVVSSSTTETAYLQELVYKLSKVGQALQENKL 451 IE+Q V+SSS ET YLQELVYKLSKVGQA+ N L Sbjct: 90 NAAILEADDDEELLEKVKKDRKKRIEKQGVISSSNKETGYLQELVYKLSKVGQAIDNNDL 149 Query: 452 SIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKIEVDTFNSSLTTLISSVTRNDIKSSKI 631 S A+S LG +T ADW+QK N AF+KLSSSPEEK EVD FNSSL +LISSV RND++SSKI Sbjct: 150 SAASSFLGSNTDADWVQKANIAFTKLSSSPEEKSEVDAFNSSLASLISSVVRNDMESSKI 209 Query: 632 AFVSSVVALEKWTVLSGLVGQLNGL 706 AFVSS A EKWT L+GLVG+L GL Sbjct: 210 AFVSSATAFEKWTTLTGLVGRLKGL 234 >ref|XP_002324647.1| predicted protein [Populus trichocarpa] gi|222866081|gb|EEF03212.1| predicted protein [Populus trichocarpa] Length = 235 Score = 178 bits (452), Expect = 1e-42 Identities = 99/172 (57%), Positives = 114/172 (66%) Frame = +2 Query: 191 IITKRNLITNFTTIFTLSLAGKGFFXXXXXXXXXXXXXXXXXXXXXXXXXMIERQAVVSS 370 IITKR+L F T F SLA +G +ERQ V+SS Sbjct: 64 IITKRSLSICFLTSFVFSLASRGSSSSNAAILEADDDEELLEKVKRDRKKRLERQGVISS 123 Query: 371 STTETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEK 550 + E YLQ+LVYKLSKVGQA+ N LS A+SVLG ST DW++K N AF+KLSSSPEEK Sbjct: 124 ANKEKGYLQDLVYKLSKVGQAIDNNDLSTASSVLGGSTDTDWVKKANIAFTKLSSSPEEK 183 Query: 551 IEVDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTVLSGLVGQLNGL 706 IEVDTFNSSL++LISSVT NDI+SSK AFVSS A EKWT L+GL GQL GL Sbjct: 184 IEVDTFNSSLSSLISSVTSNDIESSKTAFVSSATAFEKWTTLTGLFGQLKGL 235 >gb|AFK39859.1| unknown [Medicago truncatula] Length = 223 Score = 178 bits (451), Expect = 1e-42 Identities = 93/171 (54%), Positives = 117/171 (68%) Frame = +2 Query: 194 ITKRNLITNFTTIFTLSLAGKGFFXXXXXXXXXXXXXXXXXXXXXXXXXMIERQAVVSSS 373 +TKR++ F T LSL+GKG F +E+Q V+SSS Sbjct: 53 VTKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDAELLEKVKKDRKKRLEKQGVISSS 112 Query: 374 TTETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKI 553 T ET YLQ+LVYKLS+VGQA+++N L+ A SVLG ADW+QK N A +KLSSSPEEK Sbjct: 113 TKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIALNKLSSSPEEKS 172 Query: 554 EVDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTVLSGLVGQLNGL 706 EVDTFNSSL +L+SSV +ND++SSKIAFVSS A+EKWT L+GLVG+L G+ Sbjct: 173 EVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLTGLVGKLKGI 223 >ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula] gi|355510412|gb|AES91554.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula] Length = 223 Score = 178 bits (451), Expect = 1e-42 Identities = 93/171 (54%), Positives = 117/171 (68%) Frame = +2 Query: 194 ITKRNLITNFTTIFTLSLAGKGFFXXXXXXXXXXXXXXXXXXXXXXXXXMIERQAVVSSS 373 +TKR++ F T LSL+GKG F +E+Q V+SSS Sbjct: 53 VTKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDVELLEKVKKDRKKRLEKQGVISSS 112 Query: 374 TTETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADWIQKVNKAFSKLSSSPEEKI 553 T ET YLQ+LVYKLS+VGQA+++N L+ A SVLG ADW+QK N A +KLSSSPEEK Sbjct: 113 TKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIALNKLSSSPEEKS 172 Query: 554 EVDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTVLSGLVGQLNGL 706 EVDTFNSSL +L+SSV +ND++SSKIAFVSS A+EKWT L+GLVG+L G+ Sbjct: 173 EVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLTGLVGKLKGI 223 >ref|XP_004139301.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Cucumis sativus] gi|449493633|ref|XP_004159385.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Cucumis sativus] Length = 238 Score = 175 bits (444), Expect = 8e-42 Identities = 97/190 (51%), Positives = 118/190 (62%), Gaps = 10/190 (5%) Frame = +2 Query: 167 SSRLIIC----------PIITKRNLITNFTTIFTLSLAGKGFFXXXXXXXXXXXXXXXXX 316 + RL+IC P +TKR L F + F L G+GF Sbjct: 49 TKRLVICKSSSDPPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLE 108 Query: 317 XXXXXXXXMIERQAVVSSSTTETAYLQELVYKLSKVGQALQENKLSIANSVLGPSTKADW 496 +E+Q V+SS+ E YLQELVYKLSKVGQA+ N S A+SVLG S+ ADW Sbjct: 109 KVKKDRKKRLEKQGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADW 168 Query: 497 IQKVNKAFSKLSSSPEEKIEVDTFNSSLTTLISSVTRNDIKSSKIAFVSSVVALEKWTVL 676 ++K N AF+KLSSSPEEK EVD FNSSL +LISSVT+ND++SSK AFV+S A EKWT L Sbjct: 169 VKKANSAFNKLSSSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWTAL 228 Query: 677 SGLVGQLNGL 706 +GLVGQL GL Sbjct: 229 AGLVGQLKGL 238