BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023623
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula] g...    63   1e-07
ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula] g...    63   1e-07
ref|XP_004144305.1| PREDICTED: F-box protein SKIP24-like [Cucumi...    62   2e-07
ref|XP_004157990.1| PREDICTED: F-box protein SKIP24-like [Cucumi...    62   2e-07
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...    61   3e-07

>ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499791|gb|AES80994.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 269

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 46/143 (32%), Positives = 71/143 (49%)
 Frame = -1

Query: 803 VESLPNEIWMYILEMGISNYTLGHIDVCSYSICCKHLNKLANQDTLWSTLLDLKFPGWNQ 624
           + SLP E+W  ILE+GI +  L + D+C  SI C+ L++L+ +D+LW+ LL   FP  + 
Sbjct: 1   MSSLPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFP--SS 58

Query: 623 DDGGRTSSKKSLYIDLHHKYIHLRARMRHFSVKLYQMDQEMDAIAKQIEDFDPQQSLETL 444
                +SS KSLY  L  +    R    H  V L +  Q ++  ++++ D     S E L
Sbjct: 59  STSSSSSSSKSLY-KLRFERDKERKIAAHRRVVLRKESQILEH-SRRLHDIQTCVSQEKL 116

Query: 443 NARSVAYREEFARMKQEHKSILN 375
            A   +      R  +E    LN
Sbjct: 117 KAIQTSTELSHLRRVREASVALN 139


>ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499773|gb|AES80976.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 241

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 46/143 (32%), Positives = 71/143 (49%)
 Frame = -1

Query: 803 VESLPNEIWMYILEMGISNYTLGHIDVCSYSICCKHLNKLANQDTLWSTLLDLKFPGWNQ 624
           + SLP E+W  ILE+GI +  L + D+C  SI C+ L++L+ +D+LW+ LL   FP  + 
Sbjct: 1   MSSLPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFP--SS 58

Query: 623 DDGGRTSSKKSLYIDLHHKYIHLRARMRHFSVKLYQMDQEMDAIAKQIEDFDPQQSLETL 444
                +SS KSLY  L  +    R    H  V L +  Q ++  ++++ D     S E L
Sbjct: 59  STSSSSSSSKSLY-KLRFERDKERKIAAHRRVVLRKESQILEH-SRRLHDIQTCVSQEKL 116

Query: 443 NARSVAYREEFARMKQEHKSILN 375
            A   +      R  +E    LN
Sbjct: 117 KAIQTSTELSHLRRVREASVALN 139


>ref|XP_004144305.1| PREDICTED: F-box protein SKIP24-like [Cucumis sativus]
          Length = 243

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
 Frame = -1

Query: 803 VESLPNEIWMYILEMGISNYTLGHIDVCSYSICCKHLNKLANQDTLWSTLLDLKFPGWNQ 624
           +  LP+E+W  IL++G+  Y L + D+C  SI    L +L++ D+LWS LL   +P  + 
Sbjct: 1   MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60

Query: 623 DDGGRTSSKKSLY-IDLHH-----KYIHLRARMRHFSV------KLYQMDQEM-DAIAKQ 483
                 SS KSLY I L       K  H RA +R  S       ++ Q+++ + +   K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120

Query: 482 IEDFDPQQSLETLNARSVA---YREEFARMKQE 393
              F    +L T+   +VA   ++ E  R +Q+
Sbjct: 121 TTSFTEFSNLRTVREATVALNVWQPEVIRARQK 153


>ref|XP_004157990.1| PREDICTED: F-box protein SKIP24-like [Cucumis sativus]
          Length = 243

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
 Frame = -1

Query: 803 VESLPNEIWMYILEMGISNYTLGHIDVCSYSICCKHLNKLANQDTLWSTLLDLKFPGWNQ 624
           +  LP+E+W  IL++G+  Y L + D+C  SI    L +L++ D+LWS LL   +P  + 
Sbjct: 1   MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60

Query: 623 DDGGRTSSKKSLY-IDLHH-----KYIHLRARMRHFSV------KLYQMDQEM-DAIAKQ 483
                 SS KSLY I L       K  H RA +R  S       ++ Q+++ + +   K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120

Query: 482 IEDFDPQQSLETLNARSVA---YREEFARMKQE 393
              F    +L T+   +VA   ++ E  R +Q+
Sbjct: 121 TTTFTEFSNLRTVREATVALNVWQPEVIRARQK 153


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
 Frame = -1

Query: 794 LPNEIWMYILEMGISNYTLGHIDVCSYSICCKHLNKLANQDTLWSTLLDLKFPGWNQD-- 621
           +P+E+W  ILEMGI N  L + D+C  SI C+ L++L+ +++LW  LL   FP  NQ   
Sbjct: 4   VPDELWRQILEMGIQNSKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPSPNQQNP 63

Query: 620 --DGGRTSSKKSLY 585
             +   ++S KS Y
Sbjct: 64  NPNNSTSASAKSTY 77