BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023596
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]   614   e-173
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...   611   e-173
ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   591   e-166
ref|XP_004153842.1| PREDICTED: helicase SKI2W-like, partial [Cuc...   562   e-158
emb|CBI16013.3| unnamed protein product [Vitis vinifera]              556   e-156

>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score =  614 bits (1583), Expect = e-173
 Identities = 315/399 (78%), Positives = 343/399 (85%), Gaps = 8/399 (2%)
 Frame = -2

Query: 1175 KKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKNXXXXXXXXXT 996
            K+IRVTGTTKRPVPLEHC+FYSGELY ICESE+F PQGLKTAKD +KKKN         T
Sbjct: 542  KQIRVTGTTKRPVPLEHCIFYSGELYKICESETFLPQGLKTAKDVHKKKNLSTGGGGSGT 601

Query: 995  L--PASVAPHGGAPVRQQRENFNRGKQQKHSGNQNAGQFSGTAGPNQ------STWGARK 840
               P S A H GA   Q+REN  RGKQ K+SG+Q  G F GT G NQ      S WG+R+
Sbjct: 602  YSGPPSAA-HDGARA-QRRENPGRGKQNKYSGSQKVGNFYGTGGGNQNSSGSQSNWGSRR 659

Query: 839  SEASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVFCDKAF 660
            SEASLW+ LINKLSKKSLLPV+IFCFSKNRCD SAD MT  DLTSSSEK +I VFC++AF
Sbjct: 660  SEASLWLLLINKLSKKSLLPVVIFCFSKNRCDISADKMTGIDLTSSSEKHEIHVFCERAF 719

Query: 659  SRLKGSDRNLPQVVRVQKLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMG 480
            SRLKGSDRNLPQV+RVQ LL RGIGVHHAGLLPIVKEVVEMLFCRGV+KVLFSTETFAMG
Sbjct: 720  SRLKGSDRNLPQVIRVQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMG 779

Query: 479  VNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPEERD 300
            VNAPARTVVFD+LRKFDG+EFRQLLPGEYTQMAGRAGRRGLDKIGTVV+MCRDEIP+ERD
Sbjct: 780  VNAPARTVVFDSLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVMCRDEIPDERD 839

Query: 299  LKHVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKEQLLMR 120
            LKHVIVGSATRL SQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEK+QLLMR
Sbjct: 840  LKHVIVGSATRLASQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMR 899

Query: 119  KLAQPTTVIECIKGEPAIEEYFELLTEADRHREFVLEKI 3
            KLAQPT  IECIKGEP IEEY+++ TEA++H   +LE +
Sbjct: 900  KLAQPTKTIECIKGEPTIEEYYDMYTEAEQHSNQILETV 938


>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
            helicase, putative [Ricinus communis]
          Length = 1335

 Score =  611 bits (1576), Expect = e-173
 Identities = 310/397 (78%), Positives = 342/397 (86%), Gaps = 6/397 (1%)
 Frame = -2

Query: 1175 KKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKNXXXXXXXXXT 996
            KKI+VTGTTKRPVPLEHC+FYSGELY ICE+E+F PQGL+ AKDA+KKKN          
Sbjct: 510  KKIQVTGTTKRPVPLEHCLFYSGELYKICENETFIPQGLRVAKDAHKKKNTSAVSS---- 565

Query: 995  LPASVAPHGGAPVRQQRENFNRGKQQKHSGNQNAGQFSGTA------GPNQSTWGARKSE 834
               S+A   GA  ++ RE  NR KQ KH G+QNAG FSGT+      G  Q+ WG+R+SE
Sbjct: 566  --GSLALRDGAHGKK-REYLNRNKQNKHFGSQNAGSFSGTSWGNQNNGNGQNNWGSRRSE 622

Query: 833  ASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVFCDKAFSR 654
            ASLW+QL+NKLSKKSLLPV+IFCFSKNRCDKSAD M+ TDLTSSSEKS+IRVFCDKAFSR
Sbjct: 623  ASLWLQLVNKLSKKSLLPVVIFCFSKNRCDKSADGMSGTDLTSSSEKSEIRVFCDKAFSR 682

Query: 653  LKGSDRNLPQVVRVQKLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 474
            LKGSDRNLPQ+VRVQ LL RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN
Sbjct: 683  LKGSDRNLPQIVRVQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 742

Query: 473  APARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPEERDLK 294
            APARTVVFD LRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTV++MCRDEIP+ERDLK
Sbjct: 743  APARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVIVMCRDEIPDERDLK 802

Query: 293  HVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKEQLLMRKL 114
            HVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFH QKKLPE +Q+LMRKL
Sbjct: 803  HVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHTQKKLPETQQVLMRKL 862

Query: 113  AQPTTVIECIKGEPAIEEYFELLTEADRHREFVLEKI 3
            AQPT  IECIKGEP IEEY+++  EA+ +   + E +
Sbjct: 863  AQPTKAIECIKGEPDIEEYYDMFLEAEEYSNQISEAV 899


>ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 1352

 Score =  591 bits (1523), Expect = e-166
 Identities = 300/388 (77%), Positives = 332/388 (85%), Gaps = 6/388 (1%)
 Frame = -2

Query: 1175 KKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKNXXXXXXXXXT 996
            K+I VTGT KRPVPLEHC+FYSGELY ICESE F   GLK AKDA KKKN         +
Sbjct: 523  KRIHVTGTAKRPVPLEHCIFYSGELYKICESEIFLSHGLKAAKDASKKKNSSVVGGAGGS 582

Query: 995  LPASVAPHGGAPVRQQRENFNRGKQQKHSGNQNAGQFSGTAGPNQ------STWGARKSE 834
               +   + G   R+  E+FNR KQ KHSG+QN G FSGT+  NQ      + WG+R+S+
Sbjct: 583  HAGASVANDGTKNRKV-ESFNRSKQNKHSGSQNLGNFSGTSWGNQKNGDGHNNWGSRRSD 641

Query: 833  ASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVFCDKAFSR 654
            ASLW+ LIN+LSKKSLLPV+IFCFSKNRCDKSADN+ + DLTSSSEKS+IRVFCDKAFSR
Sbjct: 642  ASLWLLLINRLSKKSLLPVVIFCFSKNRCDKSADNIYSIDLTSSSEKSEIRVFCDKAFSR 701

Query: 653  LKGSDRNLPQVVRVQKLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 474
            LKGSDR+LPQ+VRVQ LL RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN
Sbjct: 702  LKGSDRSLPQIVRVQGLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 761

Query: 473  APARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPEERDLK 294
            APARTVVFD LRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTV++MCR+EIPEE+DLK
Sbjct: 762  APARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVIVMCREEIPEEKDLK 821

Query: 293  HVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKEQLLMRKL 114
             VIVG+AT+LESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEK+QLLMRKL
Sbjct: 822  RVIVGTATKLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKL 881

Query: 113  AQPTTVIECIKGEPAIEEYFELLTEADR 30
            AQPT  IECIKGE  IEEY++L  EA++
Sbjct: 882  AQPTRTIECIKGEATIEEYYDLYAEAEK 909


>ref|XP_004153842.1| PREDICTED: helicase SKI2W-like, partial [Cucumis sativus]
          Length = 520

 Score =  562 bits (1448), Expect = e-158
 Identities = 287/367 (78%), Positives = 315/367 (85%), Gaps = 6/367 (1%)
 Frame = -2

Query: 1175 KKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKNXXXXXXXXXT 996
            K+I VTGT KRPVPLEHC+FYSGELY ICESE F   GLK AKDA KKKN         +
Sbjct: 155  KRIHVTGTAKRPVPLEHCIFYSGELYKICESEIFLSHGLKAAKDASKKKNSSVVGGAGGS 214

Query: 995  LPASVAPHGGAPVRQQRENFNRGKQQKHSGNQNAGQFSGTAGPNQ------STWGARKSE 834
               +   + G   R+  E+FNR KQ KHSG+QN G FSGT+  NQ      + WG+R+S+
Sbjct: 215  HAGASVANDGTKNRKV-ESFNRSKQNKHSGSQNLGNFSGTSWGNQKNGDGHNNWGSRRSD 273

Query: 833  ASLWMQLINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVFCDKAFSR 654
            ASLW+ LIN+LSKKSLLPV+IFCFSKNRCDKSADN+ + DLTSSSEKS+IRVFCDKAFSR
Sbjct: 274  ASLWLLLINRLSKKSLLPVVIFCFSKNRCDKSADNIYSIDLTSSSEKSEIRVFCDKAFSR 333

Query: 653  LKGSDRNLPQVVRVQKLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 474
            LKGSDR+LPQ+VRVQ LL RGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN
Sbjct: 334  LKGSDRSLPQIVRVQGLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 393

Query: 473  APARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPEERDLK 294
            APARTVVFD LRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTV++MCR+EIPEE+DLK
Sbjct: 394  APARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVIVMCREEIPEEKDLK 453

Query: 293  HVIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKEQLLMRKL 114
             VIVG+AT+LESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEK+QLLMRKL
Sbjct: 454  RVIVGTATKLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKL 513

Query: 113  AQPTTVI 93
            AQPT  I
Sbjct: 514  AQPTRTI 520


>emb|CBI16013.3| unnamed protein product [Vitis vinifera]
          Length = 1082

 Score =  556 bits (1434), Expect = e-156
 Identities = 288/391 (73%), Positives = 312/391 (79%)
 Frame = -2

Query: 1175 KKIRVTGTTKRPVPLEHCVFYSGELYTICESESFQPQGLKTAKDAYKKKNXXXXXXXXXT 996
            K+IRVTGTTKRPVPLEHC+FYSGELY ICESE+F PQG                      
Sbjct: 304  KQIRVTGTTKRPVPLEHCIFYSGELYKICESETFLPQG---------------------- 341

Query: 995  LPASVAPHGGAPVRQQRENFNRGKQQKHSGNQNAGQFSGTAGPNQSTWGARKSEASLWMQ 816
                            REN  RGKQ   S               QS WG+R+SEASLW+ 
Sbjct: 342  ----------------RENPGRGKQNNGS---------------QSNWGSRRSEASLWLL 370

Query: 815  LINKLSKKSLLPVIIFCFSKNRCDKSADNMTTTDLTSSSEKSQIRVFCDKAFSRLKGSDR 636
            LINKLSKKSLLPV+IFCFSKNRCD SAD MT  DLTSSSEK +I VFC++AFSRLKGSDR
Sbjct: 371  LINKLSKKSLLPVVIFCFSKNRCDISADKMTGIDLTSSSEKHEIHVFCERAFSRLKGSDR 430

Query: 635  NLPQVVRVQKLLLRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTV 456
            NLPQV+RVQ LL RGIGVHHAGLLPIVKEVVEMLFCRGV+KVLFSTETFAMGVNAPARTV
Sbjct: 431  NLPQVIRVQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTV 490

Query: 455  VFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVIMCRDEIPEERDLKHVIVGS 276
            VFD+LRKFDG+EFRQLLPGEYTQMAGRAGRRGLDKIGTVV+MCRDEIP+ERDLKHVIVGS
Sbjct: 491  VFDSLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVMCRDEIPDERDLKHVIVGS 550

Query: 275  ATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKEQLLMRKLAQPTTV 96
            ATRL SQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEK+QLLMRKLAQPT  
Sbjct: 551  ATRLASQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKLAQPTKT 610

Query: 95   IECIKGEPAIEEYFELLTEADRHREFVLEKI 3
            IECIKGEP IEEY+++ TEA++H   +LE +
Sbjct: 611  IECIKGEPTIEEYYDMYTEAEQHSNQILETV 641