BLASTX nr result

ID: Coptis21_contig00023566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023566
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    95   6e-18
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera]    93   2e-17
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    92   5e-17

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score =  112 bits (281), Expect = 3e-23
 Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
 Frame = +3

Query: 9    IMSKIDRCVVNSLWNRKHPNAKVEFLPHGVSDHSPILL-LWTQHANKAWPFRFKNYWVEQ 185
            IM K+DR +VN  WN K P ++  FLP G+SDHSP+++ +     NK  PFRF + W++ 
Sbjct: 572  IMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDH 631

Query: 186  RDFQRIVQEVWQVKIYSNPMYILIQKLKLLKERLKPWAKQNLSNLHVRVEQAREGLYDVQ 365
             +F  +V++VW       PMY L  KL+ LK+ LK +   + SN+  RV  A+  +   Q
Sbjct: 632  DEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQ 691

Query: 366  RQVQAHPWDQYLGQKEKEALQRYSELARLEAVEIRSKQEGEWMREGDKCTAFFFKFI 536
            + +     +  L  +E++ + +Y+   R E    + K   +W+  GD+ T++F K +
Sbjct: 692  QALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSV 748


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
 Frame = +3

Query: 6   RIMSKIDRCVVNSLWNRKHPNAKVEFLPHGVSDHSPILL-LWTQHANKAWPFRFKNYWVE 182
           RI S+ID+  VN  W  ++P+  VE+   G+SDHSP++  L TQH     PF+F N+  +
Sbjct: 194 RISSRIDKSFVNVAWINQYPDVVVEYREAGISDHSPLIFNLATQHDEGGRPFKFLNFLAD 253

Query: 183 QRDFQRIVQEVWQVKIYSNPMYILIQKLKLLKERLKPWAKQNLSNLHVRVEQAREGLYDV 362
           Q  F  +V+E W    +   M  +  +L+ +K  LK +  +  S  H +VE+ R  L  V
Sbjct: 254 QNGFVEVVKEAWGSANHRFKMKNIWVRLQAVKRALKSFHSKKFSKAHCQVEELRRKLAAV 313

Query: 363 QRQVQAHPWDQYLGQKEKEALQRYSELARLEAVEIRSKQEGEWMREGDKCTAFFFKFIE 539
           Q   +     + L ++EK+ + +  + + ++   ++ K   +W+  GD  + FFF  I+
Sbjct: 314 QALPEVSQVSE-LQEEEKDLIAQLRKWSTIDESILKQKSRIQWLSLGDSNSKFFFTAIK 371


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
 Frame = +3

Query: 9   IMSKIDRCVVNSLWNRKHPNAKVEFLPHGVSDHSPILL-LWTQHANKAWPFRFKNYWVEQ 185
           IM K+DR +VN  WN   P ++V FLP G+SDHSP+++ +     N   PFRF + W++Q
Sbjct: 179 IMRKLDRVLVNEKWNLNFPLSEVRFLPSGISDHSPMVVKVIGNDQNIKKPFRFFDMWMDQ 238

Query: 186 RDFQRIVQEVWQVKIYSNPMYILIQKLKLLKERLKPWAKQNLSNLHVRVEQAREGLYDVQ 365
                             PMY L   LK LK+ LK +   + SN+  RV+ A+  +   Q
Sbjct: 239 NSG-------------GCPMYQLCCNLKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQ 285

Query: 366 RQVQAHPWDQYLGQKEKEALQRYSELARLEAVEIRSKQEGEWMREGDKCTAFFFKFI 536
           + +     +  L  +E++ + +Y+   R E    + K   +W+  GD+ T++F K +
Sbjct: 286 QALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSV 342


>emb|CAN72053.1| hypothetical protein VITISV_031314 [Vitis vinifera]
          Length = 780

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
 Frame = +3

Query: 6   RIMSKIDRCVVNSLWNRKHPNAKVEFLPHGVSDHSPILLLWTQHANKAWPFRFKNYWVEQ 185
           ++ S++DR +V+  W      A    LP  VSDH PILL          PFRF+N W+++
Sbjct: 96  QVQSRLDRFIVSKDWECYFNGAVQSLLPRLVSDHCPILLDCGGAKKGPSPFRFENMWLKE 155

Query: 186 RDFQRIVQEVWQ-VKIYSNPMYILIQKLKLLKERLKPWAKQNLSNLHVRVEQAREGLY-- 356
            DF+ +++  W   +      + L QKLK LK  LK W ++   N+ VR + A + +   
Sbjct: 156 EDFKDLLRSWWMGFQSRGTFSFTLSQKLKALKASLKIWNREVFGNVTVRKDSALKEMMFW 215

Query: 357 ---DVQRQVQAHPWDQYLGQKEKEALQRYSELARLEAVEIRSKQEGEWMREGDKCTAFFF 527
              ++ R + A   +Q L    K+AL+ Y +L  +E    R K    W+REGD+ T FF 
Sbjct: 216 DSIEMDRVLSAE--EQNL---RKQALEEYKKLVIMEETSWRQKSRELWLREGDRNTGFFH 270

Query: 528 K 530
           K
Sbjct: 271 K 271


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 52/174 (29%), Positives = 88/174 (50%)
 Frame = +3

Query: 3   GRIMSKIDRCVVNSLWNRKHPNAKVEFLPHGVSDHSPILLLWTQHANKAWPFRFKNYWVE 182
           G   SK+DRC VN  W   +P  K+  L  G+SDH P+LL  +       PF+F+N W+ 
Sbjct: 188 GNSKSKLDRCFVNPEWLTHYPTLKLSLLNRGLSDHCPLLLNSSVRNWGPKPFKFQNCWLS 247

Query: 183 QRDFQRIVQEVWQVKIYSNPMYILIQKLKLLKERLKPWAKQNLSNLHVRVEQAREGLYDV 362
                R+V++ WQ    S+PM  L+QKLK +K+ LK W ++   N+   ++Q    +  +
Sbjct: 248 DPRCMRLVKDTWQ---KSSPMG-LVQKLKTVKKDLKDWNEKVFGNIEANIKQLEHEINQL 303

Query: 363 QRQVQAHPWDQYLGQKEKEALQRYSELARLEAVEIRSKQEGEWMREGDKCTAFF 524
            +       D +  +K+K+A        + +      +   +W+++GD+ T FF
Sbjct: 304 DKISNERDLDSFELEKKKKAQVDLWSWMKTKESYWSQQSRIKWLKQGDRNTKFF 357


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