BLASTX nr result
ID: Coptis21_contig00023553
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023553 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAI48070.1| ABC transporter protein [Capsicum chinense] 59 5e-07 gb|ABK24586.1| unknown [Picea sitchensis] 56 3e-06 ref|NP_200887.1| ABC transporter F family member 1 [Arabidopsis ... 56 3e-06 tpg|DAA54940.1| TPA: hypothetical protein ZEAMMB73_097062 [Zea m... 56 3e-06 tpg|DAA54939.1| TPA: hypothetical protein ZEAMMB73_097062 [Zea m... 56 3e-06 >emb|CAI48070.1| ABC transporter protein [Capsicum chinense] Length = 250 Score = 58.5 bits (140), Expect = 5e-07 Identities = 30/38 (78%), Positives = 31/38 (81%) Frame = -1 Query: 115 EKRVAETLFGLGCDKKMQSKKNKKTRDFFGGWRMRIAL 2 EKR AE LFGLG DKKMQ+ KKTRDF GGWRMRIAL Sbjct: 194 EKRAAEILFGLGFDKKMQA---KKTRDFSGGWRMRIAL 228 >gb|ABK24586.1| unknown [Picea sitchensis] Length = 599 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/38 (76%), Positives = 30/38 (78%) Frame = -1 Query: 115 EKRVAETLFGLGCDKKMQSKKNKKTRDFFGGWRMRIAL 2 EKR AE LFGLG DKKMQ+ KKT DF GGWRMRIAL Sbjct: 195 EKRAAEILFGLGFDKKMQT---KKTSDFSGGWRMRIAL 229 >ref|NP_200887.1| ABC transporter F family member 1 [Arabidopsis thaliana] gi|75333951|sp|Q9FJH6.1|AB1F_ARATH RecName: Full=ABC transporter F family member 1; Short=ABC transporter ABCF.1; Short=AtABCF1; AltName: Full=GCN20-type ATP-binding cassette protein GCN1 gi|10176907|dbj|BAB10100.1| ABC transporter [Arabidopsis thaliana] gi|22655234|gb|AAM98207.1| ABC transporter homolog PnATH-like protein [Arabidopsis thaliana] gi|24030366|gb|AAN41346.1| putative ABC transporter homolog PnATH [Arabidopsis thaliana] gi|30725400|gb|AAP37722.1| At5g60790 [Arabidopsis thaliana] gi|332009994|gb|AED97377.1| ABC transporter F family member 1 [Arabidopsis thaliana] Length = 595 Score = 55.8 bits (133), Expect = 3e-06 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = -1 Query: 115 EKRVAETLFGLGCDKKMQSKKNKKTRDFFGGWRMRIAL 2 EKR AE LFGLG DK+MQ+ KKT+DF GGWRMRIAL Sbjct: 189 EKRAAEILFGLGFDKEMQA---KKTKDFSGGWRMRIAL 223 >tpg|DAA54940.1| TPA: hypothetical protein ZEAMMB73_097062 [Zea mays] Length = 448 Score = 55.8 bits (133), Expect = 3e-06 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = -1 Query: 115 EKRVAETLFGLGCDKKMQSKKNKKTRDFFGGWRMRIAL 2 EKR AE LFGLG DK+MQ+ KKT+DF GGWRMRIAL Sbjct: 42 EKRAAEILFGLGFDKQMQA---KKTKDFSGGWRMRIAL 76 >tpg|DAA54939.1| TPA: hypothetical protein ZEAMMB73_097062 [Zea mays] Length = 595 Score = 55.8 bits (133), Expect = 3e-06 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = -1 Query: 115 EKRVAETLFGLGCDKKMQSKKNKKTRDFFGGWRMRIAL 2 EKR AE LFGLG DK+MQ+ KKT+DF GGWRMRIAL Sbjct: 189 EKRAAEILFGLGFDKQMQA---KKTKDFSGGWRMRIAL 223