BLASTX nr result

ID: Coptis21_contig00023552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023552
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059099.1| Os07g0192300 [Oryza sativa Japonica Group] g...   118   4e-25
ref|XP_003557436.1| PREDICTED: dnaJ homolog subfamily C member 1...   118   6e-25
gb|ACG34270.1| mitochondrial import inner membrane translocase s...   115   3e-24
gb|EEC81671.1| hypothetical protein OsI_25228 [Oryza sativa Indi...   115   4e-24
ref|NP_001146964.1| mitochondrial import inner membrane transloc...   115   4e-24

>ref|NP_001059099.1| Os07g0192300 [Oryza sativa Japonica Group]
           gi|113610635|dbj|BAF21013.1| Os07g0192300, partial
           [Oryza sativa Japonica Group]
          Length = 114

 Score =  118 bits (296), Expect = 4e-25
 Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 7/108 (6%)
 Frame = +1

Query: 31  VMACLSVAAAALGGRFMVTRFSG-------PRIRNFYKGGFEEVMTMVEARRILNVRGSA 189
           ++A L+VAAAAL GR+ +  ++        PR+R FY+GGF+  MT  EA  IL VR +A
Sbjct: 7   LIAGLTVAAAALAGRYSIQAWNAYKARPVVPRMRKFYEGGFQPTMTRREAGLILGVRENA 66

Query: 190 DTEKIKEAYKKVMRLNHPDVGGSHYLTRKINEAKDILLGKTSRSGSAF 333
             EK+KEA+KKVM  NHPD GGSHYL  KINEAKDILLGKT   GSAF
Sbjct: 67  HPEKVKEAHKKVMVANHPDAGGSHYLASKINEAKDILLGKTKGGGSAF 114


>ref|XP_003557436.1| PREDICTED: dnaJ homolog subfamily C member 15-like [Brachypodium
           distachyon]
          Length = 112

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/108 (57%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
 Frame = +1

Query: 31  VMACLSVAAAALGGRFMVTRFSG-------PRIRNFYKGGFEEVMTMVEARRILNVRGSA 189
           ++A L+VAAAAL GR+ +  +         PR+R FY+GGF+  M   EA  IL VR SA
Sbjct: 5   LIAGLAVAAAALAGRYSIQAWQAYKARPIVPRMRKFYEGGFQPTMNRKEAGLILGVRESA 64

Query: 190 DTEKIKEAYKKVMRLNHPDVGGSHYLTRKINEAKDILLGKTSRSGSAF 333
           + EK+KEA+KKVM  NHPD GGSHYL  KINEAKDI+LGKT   GSAF
Sbjct: 65  NAEKVKEAHKKVMVANHPDAGGSHYLASKINEAKDIMLGKTKGGGSAF 112


>gb|ACG34270.1| mitochondrial import inner membrane translocase subunit TIM14 [Zea
           mays]
          Length = 112

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/108 (54%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
 Frame = +1

Query: 31  VMACLSVAAAALGGRFMVTRFSG-------PRIRNFYKGGFEEVMTMVEARRILNVRGSA 189
           ++A L+VAAAAL GR+ +  ++        PR+R FY+GGF+  MT  EA  IL VR +A
Sbjct: 5   LIAGLAVAAAALAGRYSIQAWNAYKARLVVPRMRKFYEGGFQPTMTRREAALILGVRKTA 64

Query: 190 DTEKIKEAYKKVMRLNHPDVGGSHYLTRKINEAKDILLGKTSRSGSAF 333
             EK+KEA+K+VM  NHPD GGSHYL  KINEAKD++ GKT   GSAF
Sbjct: 65  SAEKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVMTGKTKXGGSAF 112


>gb|EEC81671.1| hypothetical protein OsI_25228 [Oryza sativa Indica Group]
           gi|222636594|gb|EEE66726.1| hypothetical protein
           OsJ_23413 [Oryza sativa Japonica Group]
          Length = 147

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 7/111 (6%)
 Frame = +1

Query: 13  MEVSPTVMACLSVAAAALGGRFMVTRFSG-------PRIRNFYKGGFEEVMTMVEARRIL 171
           +E++  ++A L+VAAAAL GR+ +  ++        PR+R FY+GGF+  MT  EA  IL
Sbjct: 19  VEMATPLIAGLTVAAAALAGRYSIQAWNAYKARPVVPRMRKFYEGGFQPTMTRREAGLIL 78

Query: 172 NVRGSADTEKIKEAYKKVMRLNHPDVGGSHYLTRKINEAKDILLGKTSRSG 324
            VR +A  EK+KEA+KKVM  NHPD GGSHYL  KINEAKDILLGKT   G
Sbjct: 79  GVRENAHPEKVKEAHKKVMVANHPDAGGSHYLASKINEAKDILLGKTKGGG 129


>ref|NP_001146964.1| mitochondrial import inner membrane translocase subunit TIM14
           precursor [Zea mays] gi|194698396|gb|ACF83282.1| unknown
           [Zea mays] gi|195604188|gb|ACG23924.1| mitochondrial
           import inner membrane translocase subunit TIM14 [Zea
           mays] gi|195605908|gb|ACG24784.1| mitochondrial import
           inner membrane translocase subunit TIM14 [Zea mays]
           gi|223973567|gb|ACN30971.1| unknown [Zea mays]
           gi|413916899|gb|AFW56831.1| hypothetical protein
           ZEAMMB73_102669 [Zea mays] gi|413916900|gb|AFW56832.1|
           hypothetical protein ZEAMMB73_102669 [Zea mays]
          Length = 112

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/108 (54%), Positives = 75/108 (69%), Gaps = 7/108 (6%)
 Frame = +1

Query: 31  VMACLSVAAAALGGRFMVTRFSG-------PRIRNFYKGGFEEVMTMVEARRILNVRGSA 189
           ++A L+VAAAAL GR+ +  ++        PR+R FY+GGF+  MT  EA  IL VR +A
Sbjct: 5   LIAGLAVAAAALAGRYSIQAWNAYKARPVVPRMRKFYEGGFQPTMTRREAALILGVRETA 64

Query: 190 DTEKIKEAYKKVMRLNHPDVGGSHYLTRKINEAKDILLGKTSRSGSAF 333
             EK+KEA+K+VM  NHPD GGSHYL  KINEAKD++ GKT   GSAF
Sbjct: 65  SAEKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVMTGKTKGGGSAF 112


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