BLASTX nr result
ID: Coptis21_contig00023546
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023546 (381 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 102 2e-20 emb|CBI19367.3| unnamed protein product [Vitis vinifera] 102 2e-20 ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 hom... 99 4e-19 ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|2... 99 4e-19 ref|XP_003549369.1| PREDICTED: pre-mRNA-processing factor 40 hom... 98 6e-19 >ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis vinifera] Length = 1020 Score = 102 bits (255), Expect = 2e-20 Identities = 49/79 (62%), Positives = 60/79 (75%) Frame = +1 Query: 1 ELMSPIERADASTDWKEVTSPDGRRYYYNKVTRQSTWNMPDEMKLAREQVERGDTQLWQP 180 ELM+PIERADAST WKE T+P+GR+YYYNKVT+QS W +P+E+KLAREQ E+ +Q Q Sbjct: 254 ELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQS 313 Query: 181 EIPVTSQAPVSVTVSPEET 237 E+ TS P V VS ET Sbjct: 314 EMGTTSNEPAVVAVSLAET 332 >emb|CBI19367.3| unnamed protein product [Vitis vinifera] Length = 1030 Score = 102 bits (255), Expect = 2e-20 Identities = 49/79 (62%), Positives = 60/79 (75%) Frame = +1 Query: 1 ELMSPIERADASTDWKEVTSPDGRRYYYNKVTRQSTWNMPDEMKLAREQVERGDTQLWQP 180 ELM+PIERADAST WKE T+P+GR+YYYNKVT+QS W +P+E+KLAREQ E+ +Q Q Sbjct: 250 ELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQS 309 Query: 181 EIPVTSQAPVSVTVSPEET 237 E+ TS P V VS ET Sbjct: 310 EMGTTSNEPAVVAVSLAET 328 >ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine max] Length = 1002 Score = 99.0 bits (245), Expect = 4e-19 Identities = 49/79 (62%), Positives = 58/79 (73%) Frame = +1 Query: 1 ELMSPIERADASTDWKEVTSPDGRRYYYNKVTRQSTWNMPDEMKLAREQVERGDTQLWQP 180 ELMSPIERADAST WKE TS +GR+YYYNKVT+QSTW++P+E+KLAREQ + Q Q Sbjct: 225 ELMSPIERADASTVWKEFTSSEGRKYYYNKVTQQSTWSIPEELKLAREQAQNAANQGMQS 284 Query: 181 EIPVTSQAPVSVTVSPEET 237 E T A VS T +P T Sbjct: 285 ETSDTCNAVVSSTETPTPT 303 >ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|222847542|gb|EEE85089.1| predicted protein [Populus trichocarpa] Length = 972 Score = 99.0 bits (245), Expect = 4e-19 Identities = 47/79 (59%), Positives = 58/79 (73%) Frame = +1 Query: 1 ELMSPIERADASTDWKEVTSPDGRRYYYNKVTRQSTWNMPDEMKLAREQVERGDTQLWQP 180 EL++PIERADASTDWKE SPDGR+YYYNKVT+QS W +P+E+KLAR +VE T Q Sbjct: 231 ELLTPIERADASTDWKEFKSPDGRKYYYNKVTKQSKWEIPEELKLARARVENTSTMEKQS 290 Query: 181 EIPVTSQAPVSVTVSPEET 237 E+ S A SV S ++T Sbjct: 291 EVFTNSHASTSVPQSADKT 309 >ref|XP_003549369.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine max] Length = 963 Score = 98.2 bits (243), Expect = 6e-19 Identities = 50/79 (63%), Positives = 60/79 (75%) Frame = +1 Query: 1 ELMSPIERADASTDWKEVTSPDGRRYYYNKVTRQSTWNMPDEMKLAREQVERGDTQLWQP 180 ELMSPIERADAST WKE TS +GR+YYYNKVT+QSTW++P+E+KLAREQ ++ Q Q Sbjct: 180 ELMSPIERADASTVWKEFTS-EGRKYYYNKVTQQSTWSIPEELKLAREQAQKAANQGMQS 238 Query: 181 EIPVTSQAPVSVTVSPEET 237 E TS A VS T +P T Sbjct: 239 ETNDTSNAAVSSTATPTPT 257