BLASTX nr result

ID: Coptis21_contig00023531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023531
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308374.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-13
ref|XP_002532341.1| Receptor protein kinase CLAVATA1 precursor, ...    52   3e-12
ref|XP_003518077.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...    58   1e-10
ref|XP_003537173.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...    55   2e-09
ref|XP_002275203.2| PREDICTED: LOW QUALITY PROTEIN: protein STRU...    64   2e-08

>ref|XP_002308374.1| predicted protein [Populus trichocarpa] gi|222854350|gb|EEE91897.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score = 59.3 bits (142), Expect(2) = 2e-13
 Identities = 35/72 (48%), Positives = 44/72 (61%)
 Frame = -1

Query: 497 DLSYNSFTGDLPSSFQNLTRRHCSVCISGSYCGQYCSYLQNNKFTGSVIFLANLHLIDLY 318
           DLSYN+FTGDLPSSF +LT                  +LQNN+FTGSV++LANL L DL 
Sbjct: 142 DLSYNNFTGDLPSSFGSLTNLTKL-------------FLQNNQFTGSVVYLANLSLTDLN 188

Query: 317 VLHGNTLHFTAL 282
           +    T HF+ +
Sbjct: 189 I---QTNHFSGV 197



 Score = 41.6 bits (96), Expect(2) = 2e-13
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = -3

Query: 225 VIPTQFQHVPNLWIGQNAFQIGGDYP 148
           VIPTQFQ +P+LWI  N F IG +YP
Sbjct: 197 VIPTQFQLIPDLWIDGNQFHIGANYP 222


>ref|XP_002532341.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223527958|gb|EEF30043.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 718

 Score = 51.6 bits (122), Expect(2) = 3e-12
 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
 Frame = -1

Query: 497 DLSYNSFTGDLPSSF---QNLTRRHCSVCISGSYCGQYCSYLQNNKFTGSVIFLANLHLI 327
           DLSYN F+GDLP SF   +NL+R                 +LQNN+FTGSVI+LA+L L 
Sbjct: 171 DLSYNDFSGDLPPSFGSLKNLSRL----------------FLQNNQFTGSVIYLADLPLT 214

Query: 326 DLYV 315
           DL +
Sbjct: 215 DLNI 218



 Score = 45.4 bits (106), Expect(2) = 3e-12
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -3

Query: 225 VIPTQFQHVPNLWIGQNAFQIGGDYP 148
           VIPTQFQ++PNLWI  N F IG +YP
Sbjct: 226 VIPTQFQYIPNLWIDGNKFHIGANYP 251


>ref|XP_003518077.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 2-like [Glycine max]
          Length = 716

 Score = 57.8 bits (138), Expect(2) = 1e-10
 Identities = 33/61 (54%), Positives = 38/61 (62%)
 Frame = -1

Query: 497 DLSYNSFTGDLPSSFQNLTRRHCSVCISGSYCGQYCSYLQNNKFTGSVIFLANLHLIDLY 318
           DLSYN+FTGDLPSSF  LT             G    +LQNN+FTGSV +LA L LIDL 
Sbjct: 170 DLSYNNFTGDLPSSFGTLT-------------GLNRLFLQNNRFTGSVTYLAELPLIDLN 216

Query: 317 V 315
           +
Sbjct: 217 I 217



 Score = 33.5 bits (75), Expect(2) = 1e-10
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 225 VIPTQFQHVPNLWIGQNAFQIGGDYP 148
           ++P  FQ +PNLWIG N F    D P
Sbjct: 225 ILPQPFQSIPNLWIGGNKFHALDDSP 250


>ref|XP_003537173.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 2-like [Glycine max]
          Length = 730

 Score = 55.5 bits (132), Expect(2) = 2e-09
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = -1

Query: 497 DLSYNSFTGDLPSSFQNLTRRHCSVCISGSYCGQYCSYLQNNKFTGSVIFLANLHLIDLY 318
           DLSYN+FTGDLPSSF +LT  +  +             LQNN+FTGSV +LA L LIDL 
Sbjct: 170 DLSYNNFTGDLPSSFGSLTDLNRLL-------------LQNNRFTGSVTYLAELPLIDLN 216

Query: 317 V 315
           +
Sbjct: 217 I 217



 Score = 32.0 bits (71), Expect(2) = 2e-09
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 225 VIPTQFQHVPNLWIGQNAF 169
           ++P  FQ +PNLWIG N F
Sbjct: 225 ILPQHFQSIPNLWIGGNKF 243


>ref|XP_002275203.2| PREDICTED: LOW QUALITY PROTEIN: protein STRUBBELIG-RECEPTOR FAMILY
           2 [Vitis vinifera]
          Length = 721

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 52/139 (37%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
 Frame = -1

Query: 497 DLSYNSFTGDLPSSF---QNLTRRHCSVCISGSYCGQYCSYLQNNKFTGSVIFLANLHLI 327
           DLS+N FTGDLPSSF   +NLTR                 +LQNNKFTGSVIFLA+L L 
Sbjct: 171 DLSHNHFTGDLPSSFGTLKNLTRL----------------FLQNNKFTGSVIFLADLPLS 214

Query: 326 DLYVLHGNTLHFTALSDSKCVVFVSNIQNNSFVVLFQRNFNMCQ--IYGLDRMH-----S 168
            L                       NIQ+N F  +  R F +     +G +R H      
Sbjct: 215 HL-----------------------NIQSNHFSGIIPRQFQLIPNLWFGGNRFHPGGNYP 251

Query: 167 K*EEIIPSDQNINSPPATD 111
             +  + ++QNINSPP T+
Sbjct: 252 PWDFPLETEQNINSPPTTE 270


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